| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is wzb [C]
Identifier: 158336239
GI number: 158336239
Start: 3131610
End: 3132080
Strand: Reverse
Name: wzb [C]
Synonym: AM1_3100
Alternate gene names: 158336239
Gene position: 3132080-3131610 (Counterclockwise)
Preceding gene: 158336240
Following gene: 158336237
Centisome position: 48.16
GC content: 47.56
Gene sequence:
>471_bases ATGCCCCAAAAGCTTTTGTTTGTCTGTCTAGGCAATATTTGCCGCTCCCCCTCTGCCGAAGGGATTATGAATCACCTGCT GCAGCAAGAGCAGCTCACCCATGAATACCAATGTGATTCTGCAGGCACTAGCAGCTATCATATTGGCGCTTCTCCAGACC GGAGAATGGCGGCAGCTGGCTTACGACAAGGTATCGTACTCACCGGCAACAGCCGCCAAGTTGAACCAGAAGATTTTGCG GAGTTCGATCTAATTCTGGCCATGGATCGCCAAAACTACCGCGATTTGGTAGCCATGAATCCAGATGAGCAATATGCCGA TAAAATCCACATGATGTGCGATTTTTGCTCTAATTTTGCCGATAAAGAGGTGCCCGATCCTTATTATGGAGGGCCTTCAG GGTTTGATTATGTGATTGATCTTCTGCTGGATGCTTGCAGTGGCTTATTGGATCATTTGCACAAATCTTAG
Upstream 100 bases:
>100_bases TCGAACAGGGACCGCTGGCCCGCTTGCACTTAAAGCACCATATCCCCTACGGTTTACATGGCAGTTTTACGCCAACGCTG TTTTAACCGGTCCCAACCCG
Downstream 100 bases:
>100_bases GGATCGTTCTCTATCGCCCCTAATAAATTATGTTCCATGGCAAACCTGACGATTTCGGCTCGATTGCTGGTTTCTGTTTT TTGCAAGAGCTTACTCACAT
Product: low molecular weight protein-tyrosine-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPQKLLFVCLGNICRSPSAEGIMNHLLQQEQLTHEYQCDSAGTSSYHIGASPDRRMAAAGLRQGIVLTGNSRQVEPEDFA EFDLILAMDRQNYRDLVAMNPDEQYADKIHMMCDFCSNFADKEVPDPYYGGPSGFDYVIDLLLDACSGLLDHLHKS
Sequences:
>Translated_156_residues MPQKLLFVCLGNICRSPSAEGIMNHLLQQEQLTHEYQCDSAGTSSYHIGASPDRRMAAAGLRQGIVLTGNSRQVEPEDFA EFDLILAMDRQNYRDLVAMNPDEQYADKIHMMCDFCSNFADKEVPDPYYGGPSGFDYVIDLLLDACSGLLDHLHKS >Mature_155_residues PQKLLFVCLGNICRSPSAEGIMNHLLQQEQLTHEYQCDSAGTSSYHIGASPDRRMAAAGLRQGIVLTGNSRQVEPEDFAE FDLILAMDRQNYRDLVAMNPDEQYADKIHMMCDFCSNFADKEVPDPYYGGPSGFDYVIDLLLDACSGLLDHLHKS
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI4757714, Length=157, Percent_Identity=38.2165605095541, Blast_Score=108, Evalue=2e-24, Organism=Homo sapiens, GI6005988, Length=157, Percent_Identity=35.6687898089172, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI96304457, Length=77, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325330, Length=136, Percent_Identity=34.5588235294118, Blast_Score=97, Evalue=8e-22, Organism=Drosophila melanogaster, GI78706770, Length=149, Percent_Identity=36.241610738255, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI78706772, Length=149, Percent_Identity=36.241610738255, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI78706766, Length=151, Percent_Identity=33.7748344370861, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI78706768, Length=151, Percent_Identity=33.7748344370861, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI78711846, Length=152, Percent_Identity=33.5526315789474, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI78706764, Length=129, Percent_Identity=35.6589147286822, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI24648069, Length=123, Percent_Identity=30.8943089430894, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 17436; Mature: 17305
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKLLFVCLGNICRSPSAEGIMNHLLQQEQLTHEYQCDSAGTSSYHIGASPDRRMAAAG CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHH LRQGIVLTGNSRQVEPEDFAEFDLILAMDRQNYRDLVAMNPDEQYADKIHMMCDFCSNFA HHCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHC DKEVPDPYYGGPSGFDYVIDLLLDACSGLLDHLHKS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQKLLFVCLGNICRSPSAEGIMNHLLQQEQLTHEYQCDSAGTSSYHIGASPDRRMAAAG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHH LRQGIVLTGNSRQVEPEDFAEFDLILAMDRQNYRDLVAMNPDEQYADKIHMMCDFCSNFA HHCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHC DKEVPDPYYGGPSGFDYVIDLLLDACSGLLDHLHKS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]