| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yjjG [C]
Identifier: 158336119
GI number: 158336119
Start: 3007490
End: 3008149
Strand: Direct
Name: yjjG [C]
Synonym: AM1_2981
Alternate gene names: 158336119
Gene position: 3007490-3008149 (Clockwise)
Preceding gene: 158336118
Following gene: 158336122
Centisome position: 46.24
GC content: 45.3
Gene sequence:
>660_bases ATGGATGCTGTAATCTTTGATCTCGATCAAACGCTGCTAGATCGTGACCGGTCTTTACGAGACTTTATCCATTGGCAATG TCACGGCATGCTCAGGCCGTATCTATCGAATCAAGCGGATTTTATCGGTCGCTTTATGGAGCTGGATGCGAATGGCACAC TTTGGAAAGATAAGGTCTATACAGCACTAATCGAGGAATTCTCTTTGACAGAGTGGTCTGTTCAAGAGTTACTGAGGGTC TATGAAAGCTGTTTTTGTGCGTTTGCTGTACCTAGAACGGGGGTTATTGAGGCGATCACCCACCTCTCTCCACAATACAA ACTGGGCTTAATCTCTAATGGCAAGTCCCCTTTTCAAGAACGCAATTTCACCGCGTTGGGAATCGCTCCATTATTTAAGA GTGTTATCGTGTCCCAGGCTGTTGGCCTTCGTAAACCAGACCCTAAAATTTTTCTACTTGGGTGCCAAGAACTTGGAGTA TCACCGCAAAAAACGATTTACGTTGGTGACAATCCGATTGCAGATATCAATGGGGCAATCAATGCGGGATTGCATACCAT TTTTGTGACAACCTCCTTATACGCTGAGTGTAAAAATGCTCATGCAGCTTGTGCAGATCTAAAGAGCTTGCCAGCGATTG TGGAATCACTTGCCGGCTGA
Upstream 100 bases:
>100_bases GTATTTTTGATTGCCCTCAGCTTTGGAGCAGTGGTGTTAGCTAAAAGCGGTTAACCTCCATAAAAGCCGCTGACACTGTA GGTTGCTCAGGACGAATCAT
Downstream 100 bases:
>100_bases AGTACTGGGTAGAACTGGTATCCATATATGAATACATATGGGTTCTGTGCTGACTTAGCAGGTAGATGTCAACGTAAAGT CAGCAGTGATCTCAATTTTG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDAVIFDLDQTLLDRDRSLRDFIHWQCHGMLRPYLSNQADFIGRFMELDANGTLWKDKVYTALIEEFSLTEWSVQELLRV YESCFCAFAVPRTGVIEAITHLSPQYKLGLISNGKSPFQERNFTALGIAPLFKSVIVSQAVGLRKPDPKIFLLGCQELGV SPQKTIYVGDNPIADINGAINAGLHTIFVTTSLYAECKNAHAACADLKSLPAIVESLAG
Sequences:
>Translated_219_residues MDAVIFDLDQTLLDRDRSLRDFIHWQCHGMLRPYLSNQADFIGRFMELDANGTLWKDKVYTALIEEFSLTEWSVQELLRV YESCFCAFAVPRTGVIEAITHLSPQYKLGLISNGKSPFQERNFTALGIAPLFKSVIVSQAVGLRKPDPKIFLLGCQELGV SPQKTIYVGDNPIADINGAINAGLHTIFVTTSLYAECKNAHAACADLKSLPAIVESLAG >Mature_219_residues MDAVIFDLDQTLLDRDRSLRDFIHWQCHGMLRPYLSNQADFIGRFMELDANGTLWKDKVYTALIEEFSLTEWSVQELLRV YESCFCAFAVPRTGVIEAITHLSPQYKLGLISNGKSPFQERNFTALGIAPLFKSVIVSQAVGLRKPDPKIFLLGCQELGV SPQKTIYVGDNPIADINGAINAGLHTIFVTTSLYAECKNAHAACADLKSLPAIVESLAG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI23308749, Length=242, Percent_Identity=25.6198347107438, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1790833, Length=203, Percent_Identity=26.1083743842365, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR011950 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24254; Mature: 24254
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVIFDLDQTLLDRDRSLRDFIHWQCHGMLRPYLSNQADFIGRFMELDANGTLWKDKVY CCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHH TALIEEFSLTEWSVQELLRVYESCFCAFAVPRTGVIEAITHLSPQYKLGLISNGKSPFQE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHH RNFTALGIAPLFKSVIVSQAVGLRKPDPKIFLLGCQELGVSPQKTIYVGDNPIADINGAI CCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCEEEECCCCCCCCCCHH NAGLHTIFVTTSLYAECKNAHAACADLKSLPAIVESLAG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDAVIFDLDQTLLDRDRSLRDFIHWQCHGMLRPYLSNQADFIGRFMELDANGTLWKDKVY CCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHH TALIEEFSLTEWSVQELLRVYESCFCAFAVPRTGVIEAITHLSPQYKLGLISNGKSPFQE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHH RNFTALGIAPLFKSVIVSQAVGLRKPDPKIFLLGCQELGVSPQKTIYVGDNPIADINGAI CCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCEEEECCCCCCCCCCHH NAGLHTIFVTTSLYAECKNAHAACADLKSLPAIVESLAG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]