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The map label for this gene is ygjM [C]

Identifier: 158335726

GI number: 158335726

Start: 2614659

End: 2615057

Strand: Reverse

Name: ygjM [C]

Synonym: AM1_2576

Alternate gene names: 158335726

Gene position: 2615057-2614659 (Counterclockwise)

Preceding gene: 158335728

Following gene: 158335720

Centisome position: 40.21

GC content: 44.36

Gene sequence:

>399_bases
ATGTCCCTTACTTTTAATGTGGATATCTACAGCCAATTGTTGGCGGAGTATCGTCCAAAGGTTATTGCTTCTGAACGGGA
AAACGAAGCTGCCATCGCACTTGCACAAAAGTTAGAACATCTCCCGAATCAAACCTCAGAACAGGAAGCGCTGCTTGATC
TACTGGTGATGCTGATTGAAAAGTATGAAGATAGCGCTTATCCGATTCTTGTCAGTAGCCCTCGTGAAGTTTTGCTGCAC
TTGATGGAGGCCAAAGGATGTATTCAAGAGGATTTGGTGGGTGTTATTGGATCGCGAGGGGTTGTGTCTGAAGTGGTGAA
CGGTAAGCGAGGTATTAGTATCGCTCAAGCTAAATCTTTGGCTGATTACTTTGGCGTTGATGCAGGACTTTTTATCTAA

Upstream 100 bases:

>100_bases
CAGTTTCGAGGCAAACTGTTGCCATAGAGTTGTTGATGTCATGATGGTGATTGCAAATATATTCTGACTCACGCTGATAA
CGATATAGACCTCTAGAAAA

Downstream 100 bases:

>100_bases
GCGATCATCGCACTCGGTATACAAGATGCTAGCCTGTTCTATCGAGCCAGTTTAGTAGAAGCGTCCCTAGGCAATAAGGC
TCAAGCCAAGGTCTATGCCC

Product: HTH transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcription Regulator With HTH Domain Protein; Transcriptional Regulator; Transcription Regulator Protein; HTH Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSLTFNVDIYSQLLAEYRPKVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIEKYEDSAYPILVSSPREVLLH
LMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSLADYFGVDAGLFI

Sequences:

>Translated_132_residues
MSLTFNVDIYSQLLAEYRPKVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIEKYEDSAYPILVSSPREVLLH
LMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSLADYFGVDAGLFI
>Mature_131_residues
SLTFNVDIYSQLLAEYRPKVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIEKYEDSAYPILVSSPREVLLHL
MEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSLADYFGVDAGLFI

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14478; Mature: 14347

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTFNVDIYSQLLAEYRPKVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIE
CCEEECHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KYEDSAYPILVSSPREVLLHLMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSL
HHCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
ADYFGVDAGLFI
HHHHCCCCCCCC
>Mature Secondary Structure 
SLTFNVDIYSQLLAEYRPKVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIE
CEEECHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KYEDSAYPILVSSPREVLLHLMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSL
HHCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
ADYFGVDAGLFI
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA