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The map label for this gene is 158335728

Identifier: 158335728

GI number: 158335728

Start: 2615494

End: 2616858

Strand: Reverse

Name: 158335728

Synonym: AM1_2578

Alternate gene names: NA

Gene position: 2616858-2615494 (Counterclockwise)

Preceding gene: 158335729

Following gene: 158335726

Centisome position: 40.24

GC content: 53.41

Gene sequence:

>1365_bases
ATGATTTTGAATATCTGGAAATGGCCCCGCACCTCTTTGCTCTCAGGCGTGACGCTTACCCTAGTGCTGGGAATTAGCGT
TGACCTGGGGCAGCCAGCCCGAGCCCATTCCCATGGGGGGGAAACTCATTCCCATACGAGAGAATCCCATTCCCATGCGG
TCGAACATTCGGTAACGGATGCCCTGCAACGGGAGATTGTCTTCTACCAAAATCGAATTCAGGCCAATCCCACAGATGGC
TTAGACCGTGCCTCTCTAGCGACCCTTTATCTGCAACTCGCCTCCTCTACTGGCAACACCCACTGGTATCACGAGGCAGA
AGAAACCGCCCGTCAGTCTTTGGCCAACTTACCCTTCAATAACCCTGAAGCTCAGCTTGCCCTGGCAAAAGTGGCTCAGG
CGGAGCATCAGTTTGCGGAAGCCCTACAGTTTGCTGAGACAGTTCTGCAGGAGAATCCCACAAATCAACAAGCCCTCTCA
ATTGTTGTGACCAGCAAGCTAGCCCAGGGGCAGCTTGATCAGGCCCAACCAGTGGCCGATCAGTTAGTGGAGCAGGCTCC
AACCTTGGTCAGCCATACCCTTCGGGCCTTGGTGCTCGTGGCTCAGGGTGAAGATCAAGCTGCCCTTCAAGATTTCCAGC
AGGCGCTGGCCCTGGAACAACCCGATCAATTGTCTCAATCAGCCTGGGCGCGAACATTGCTAGGCCGTTATTATGCCCAT
CGGGGCCAACTGCCTCTAGCGAAACAGTACTATCAAGAAGCCCTACAGCTACAGCCCCATTCTTCCTTTGCCCGGGTCAA
ACTGGCAGAACTGGAAACCCGTCAAGGTAATTACGGCGCTGCCGAAACCCTCTATCAACAACTACTTCAGCATCCAGAAT
CTTCCCATGGACTAGATCATGTGGCTTTGCAGGGACTAGCCCAATTGAAGGTTCTAGAAGGAAAACTGACCGAAGCCAGT
CAACTCTGGGATGAAGCCGAACATGAGTTTCGCGATCACCAGGATCTCGATCATTTCGGTCATCGCCGGGACTTGGCAAA
GTTACTGTTGGCGAGAGGTCACCAAGCGGATTTACCGGAAGCGTTGACCCTGATGCAGGCAGAAGCCAATCTTCGCCAGG
ATCCTGAAACTCTGAAGACTTTGGCTTGGGCGCTGTCGCGGCTGAACCGATATGGTGAGGCTCAGAGTGTGTTGCAAGAT
GCGATCGCACTCGGCATACAAGATGCCAGCCTGTTCTATCGAGCCAGTTTAGTAGAAGCGTCCCTAGGCAATAAAGCCCA
AGCCAAGGTCTATGTCCAAAAGGCGCTAGCGATAGATCCCAATTTCGATACCCGAGCAAGAGCCCTATTGGCTTTAGGTG
GGTAG

Upstream 100 bases:

>100_bases
TTCGAACTGTTCTAAAGCCGCTTGCTTTCATCCTTTGCGGATTTCCCTGCCCTGGCTTGCAGAGGATGAAAGCTTTACTA
ATCCACCATGAGGTTTTGCA

Downstream 100 bases:

>100_bases
TTCTGAGGGGCTGAAGTCTGACGACTTAAGTTCGAAATGGAAGTATCGCAATCTCAGCACGCAACTGTTCATCCCAAGCT
TGCCAGGTATCTTTTGGTAG

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MILNIWKWPRTSLLSGVTLTLVLGISVDLGQPARAHSHGGETHSHTRESHSHAVEHSVTDALQREIVFYQNRIQANPTDG
LDRASLATLYLQLASSTGNTHWYHEAEETARQSLANLPFNNPEAQLALAKVAQAEHQFAEALQFAETVLQENPTNQQALS
IVVTSKLAQGQLDQAQPVADQLVEQAPTLVSHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAH
RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDHVALQGLAQLKVLEGKLTEAS
QLWDEAEHEFRDHQDLDHFGHRRDLAKLLLARGHQADLPEALTLMQAEANLRQDPETLKTLAWALSRLNRYGEAQSVLQD
AIALGIQDASLFYRASLVEASLGNKAQAKVYVQKALAIDPNFDTRARALLALGG

Sequences:

>Translated_454_residues
MILNIWKWPRTSLLSGVTLTLVLGISVDLGQPARAHSHGGETHSHTRESHSHAVEHSVTDALQREIVFYQNRIQANPTDG
LDRASLATLYLQLASSTGNTHWYHEAEETARQSLANLPFNNPEAQLALAKVAQAEHQFAEALQFAETVLQENPTNQQALS
IVVTSKLAQGQLDQAQPVADQLVEQAPTLVSHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAH
RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDHVALQGLAQLKVLEGKLTEAS
QLWDEAEHEFRDHQDLDHFGHRRDLAKLLLARGHQADLPEALTLMQAEANLRQDPETLKTLAWALSRLNRYGEAQSVLQD
AIALGIQDASLFYRASLVEASLGNKAQAKVYVQKALAIDPNFDTRARALLALGG
>Mature_454_residues
MILNIWKWPRTSLLSGVTLTLVLGISVDLGQPARAHSHGGETHSHTRESHSHAVEHSVTDALQREIVFYQNRIQANPTDG
LDRASLATLYLQLASSTGNTHWYHEAEETARQSLANLPFNNPEAQLALAKVAQAEHQFAEALQFAETVLQENPTNQQALS
IVVTSKLAQGQLDQAQPVADQLVEQAPTLVSHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAH
RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDHVALQGLAQLKVLEGKLTEAS
QLWDEAEHEFRDHQDLDHFGHRRDLAKLLLARGHQADLPEALTLMQAEANLRQDPETLKTLAWALSRLNRYGEAQSVLQD
AIALGIQDASLFYRASLVEASLGNKAQAKVYVQKALAIDPNFDTRARALLALGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50206; Mature: 50206

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNIWKWPRTSLLSGVTLTLVLGISVDLGQPARAHSHGGETHSHTRESHSHAVEHSVTD
CEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
ALQREIVFYQNRIQANPTDGLDRASLATLYLQLASSTGNTHWYHEAEETARQSLANLPFN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCC
NPEAQLALAKVAQAEHQFAEALQFAETVLQENPTNQQALSIVVTSKLAQGQLDQAQPVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
QLVEQAPTLVSHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAH
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDH
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHH
VALQGLAQLKVLEGKLTEASQLWDEAEHEFRDHQDLDHFGHRRDLAKLLLARGHQADLPE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH
ALTLMQAEANLRQDPETLKTLAWALSRLNRYGEAQSVLQDAIALGIQDASLFYRASLVEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLGNKAQAKVYVQKALAIDPNFDTRARALLALGG
HCCCCHHHHHHHHHHHEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MILNIWKWPRTSLLSGVTLTLVLGISVDLGQPARAHSHGGETHSHTRESHSHAVEHSVTD
CEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
ALQREIVFYQNRIQANPTDGLDRASLATLYLQLASSTGNTHWYHEAEETARQSLANLPFN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCC
NPEAQLALAKVAQAEHQFAEALQFAETVLQENPTNQQALSIVVTSKLAQGQLDQAQPVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
QLVEQAPTLVSHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAH
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDH
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHH
VALQGLAQLKVLEGKLTEASQLWDEAEHEFRDHQDLDHFGHRRDLAKLLLARGHQADLPE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH
ALTLMQAEANLRQDPETLKTLAWALSRLNRYGEAQSVLQDAIALGIQDASLFYRASLVEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLGNKAQAKVYVQKALAIDPNFDTRARALLALGG
HCCCCHHHHHHHHHHHEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA