Click here to switch to the map view.

The map label for this gene is 158335576

Identifier: 158335576

GI number: 158335576

Start: 2430157

End: 2431479

Strand: Direct

Name: 158335576

Synonym: AM1_2426

Alternate gene names: NA

Gene position: 2430157-2431479 (Clockwise)

Preceding gene: 158335573

Following gene: 158335577

Centisome position: 37.37

GC content: 32.73

Gene sequence:

>1323_bases
ATGAATGACAAAGAAAGATGCTTAAATAGCCAAAGCAATGATTTGCTATTGAGCTATCAAGAAAGTATAGAAATAATAGA
AAATGAAGATAAAAAATTATCAGCCTCAGAAATTATAAATACCTTCAAAATTCGTGACATTATCCAGACTATTATCAATA
GCAAAAAAGATGACTATTATGAGATATCACCAATCCTTTTAAAGTTAGATGCAAGACTAGAAAAACAATCTGACAAAATT
ACACAAGCTATTAATATTGAAAAGCTATGTAGAAGTTTTCATCCTAATAAAGATTTTTGGTGGTGGCACCTAAAACCAAC
TATTCCAGTTCATTGGTACGATAAATATGATCGATTATTTAATATATTTTCTATTATTATTTTGGCTGCGTCTTTATGTA
TTTTATTCGACATCTCTTCCAGGGTTATCAGTCCTGATCCTGACTTGCTAAGTTCATTATTCCTTGCAGTTCAAGGTGCA
CTGACAACCTTATTCGCAGCAGTCATTATTACTCATGAAGGGCAGGAACTAGTTACAAGAATATTCAGTTTCATGAAAAT
CTCTCCTCATTTTAGGCAAGAAGTGCAACTAGGTGCAGCAGTTTTTTGTTTGATCCTCTTAATTATCTTTCGTACCTTTT
TACCTAACATCTCCAATCATTTTTACAATAAAGGTCTGAATTTTACTGATACAGGTAGTATTAGTAGTGCTATGGCTTCA
TACCACCGTGCTCTTTCAATCGATCCAGAGAATGATTTAGCTAGATTTAATATTGCTGTCATATATGAAAAGCTAAGCGA
ATACAAAAAAGCTGAAGAAAACTTCAAGATTGCAAGTTTAAAACTAAAAATAGAAGCCTCAGATGAATCACCTTTAAAAC
CCATTGAGAAACTACAGTTAGAAGCTATAAATAGATTATCACGGTTATATATAATAAGAGAAAATTACTCAGAAGCTGTC
AAGCGACTAGACAAAATAAAAGCAATAATAGATCAAAAAGCTGGAGAAAAAATAGATCCAGAACTAGGATATGCAACAAT
TAAGAACTTAGGCTGGGCTAGATATGAGCAATCACGATATAATGAGGCTATTCCATTATTAGAACAAGCCATCGGCTTTC
CTATTAAAGATGAAAAAAAGGCTTCTGCATTCTGTCTATTAGCACAATCACTTAAAAAAGCTAAACATGCTGATTACGCA
GTATACCAAAACTATGAAAAGTGCATTCAGTATGCAGACTCAGAAATCCCAGAAGAAGACGAATGGATTCCTCAAGCTAG
AAATTTCATCTCTAACTCCTATCAAGAATTAAAGTCTCAATGA

Upstream 100 bases:

>100_bases
AATTCAGGAGTTATAAGCTATTGATCGCCTGATTATTCTTCAGTTAATATCTCGTAAATTTTGATGCAAAATATCCAATA
ATTCAACTAACTAAAATACC

Downstream 100 bases:

>100_bases
TGTAGACCTCTGAAAATCAGTATTATGGCAACTTGAATGACGCCAATTTATTCAACTAACAATAACTTGTCTAATAACCC
CTGACATCTTTGCCGATAGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNDKERCLNSQSNDLLLSYQESIEIIENEDKKLSASEIINTFKIRDIIQTIINSKKDDYYEISPILLKLDARLEKQSDKI
TQAINIEKLCRSFHPNKDFWWWHLKPTIPVHWYDKYDRLFNIFSIIILAASLCILFDISSRVISPDPDLLSSLFLAVQGA
LTTLFAAVIITHEGQELVTRIFSFMKISPHFRQEVQLGAAVFCLILLIIFRTFLPNISNHFYNKGLNFTDTGSISSAMAS
YHRALSIDPENDLARFNIAVIYEKLSEYKKAEENFKIASLKLKIEASDESPLKPIEKLQLEAINRLSRLYIIRENYSEAV
KRLDKIKAIIDQKAGEKIDPELGYATIKNLGWARYEQSRYNEAIPLLEQAIGFPIKDEKKASAFCLLAQSLKKAKHADYA
VYQNYEKCIQYADSEIPEEDEWIPQARNFISNSYQELKSQ

Sequences:

>Translated_440_residues
MNDKERCLNSQSNDLLLSYQESIEIIENEDKKLSASEIINTFKIRDIIQTIINSKKDDYYEISPILLKLDARLEKQSDKI
TQAINIEKLCRSFHPNKDFWWWHLKPTIPVHWYDKYDRLFNIFSIIILAASLCILFDISSRVISPDPDLLSSLFLAVQGA
LTTLFAAVIITHEGQELVTRIFSFMKISPHFRQEVQLGAAVFCLILLIIFRTFLPNISNHFYNKGLNFTDTGSISSAMAS
YHRALSIDPENDLARFNIAVIYEKLSEYKKAEENFKIASLKLKIEASDESPLKPIEKLQLEAINRLSRLYIIRENYSEAV
KRLDKIKAIIDQKAGEKIDPELGYATIKNLGWARYEQSRYNEAIPLLEQAIGFPIKDEKKASAFCLLAQSLKKAKHADYA
VYQNYEKCIQYADSEIPEEDEWIPQARNFISNSYQELKSQ
>Mature_440_residues
MNDKERCLNSQSNDLLLSYQESIEIIENEDKKLSASEIINTFKIRDIIQTIINSKKDDYYEISPILLKLDARLEKQSDKI
TQAINIEKLCRSFHPNKDFWWWHLKPTIPVHWYDKYDRLFNIFSIIILAASLCILFDISSRVISPDPDLLSSLFLAVQGA
LTTLFAAVIITHEGQELVTRIFSFMKISPHFRQEVQLGAAVFCLILLIIFRTFLPNISNHFYNKGLNFTDTGSISSAMAS
YHRALSIDPENDLARFNIAVIYEKLSEYKKAEENFKIASLKLKIEASDESPLKPIEKLQLEAINRLSRLYIIRENYSEAV
KRLDKIKAIIDQKAGEKIDPELGYATIKNLGWARYEQSRYNEAIPLLEQAIGFPIKDEKKASAFCLLAQSLKKAKHADYA
VYQNYEKCIQYADSEIPEEDEWIPQARNFISNSYQELKSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50830; Mature: 50830

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKERCLNSQSNDLLLSYQESIEIIENEDKKLSASEIINTFKIRDIIQTIINSKKDDYY
CCCHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
EISPILLKLDARLEKQSDKITQAINIEKLCRSFHPNKDFWWWHLKPTIPVHWYDKYDRLF
EHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHH
NIFSIIILAASLCILFDISSRVISPDPDLLSSLFLAVQGALTTLFAAVIITHEGQELVTR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IFSFMKISPHFRQEVQLGAAVFCLILLIIFRTFLPNISNHFYNKGLNFTDTGSISSAMAS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHH
YHRALSIDPENDLARFNIAVIYEKLSEYKKAEENFKIASLKLKIEASDESPLKPIEKLQL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHH
EAINRLSRLYIIRENYSEAVKRLDKIKAIIDQKAGEKIDPELGYATIKNLGWARYEQSRY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHH
NEAIPLLEQAIGFPIKDEKKASAFCLLAQSLKKAKHADYAVYQNYEKCIQYADSEIPEED
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
EWIPQARNFISNSYQELKSQ
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDKERCLNSQSNDLLLSYQESIEIIENEDKKLSASEIINTFKIRDIIQTIINSKKDDYY
CCCHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
EISPILLKLDARLEKQSDKITQAINIEKLCRSFHPNKDFWWWHLKPTIPVHWYDKYDRLF
EHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHH
NIFSIIILAASLCILFDISSRVISPDPDLLSSLFLAVQGALTTLFAAVIITHEGQELVTR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IFSFMKISPHFRQEVQLGAAVFCLILLIIFRTFLPNISNHFYNKGLNFTDTGSISSAMAS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHH
YHRALSIDPENDLARFNIAVIYEKLSEYKKAEENFKIASLKLKIEASDESPLKPIEKLQL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHH
EAINRLSRLYIIRENYSEAVKRLDKIKAIIDQKAGEKIDPELGYATIKNLGWARYEQSRY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHH
NEAIPLLEQAIGFPIKDEKKASAFCLLAQSLKKAKHADYAVYQNYEKCIQYADSEIPEED
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
EWIPQARNFISNSYQELKSQ
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA