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The map label for this gene is 158335525

Identifier: 158335525

GI number: 158335525

Start: 2374513

End: 2376123

Strand: Reverse

Name: 158335525

Synonym: AM1_2373

Alternate gene names: NA

Gene position: 2376123-2374513 (Counterclockwise)

Preceding gene: 158335528

Following gene: 158335522

Centisome position: 36.53

GC content: 48.85

Gene sequence:

>1611_bases
GTGTCAACCTCAATCTTTCAATCAGAGCAATTATTGTTTACACCAGGAACGCCAACACCGAATAGGCTTCCGCTTATTTT
CGCATTTCCAAACACGTACTGTGTAGGAATAACGAGTTTGGGCTTCCAAGTCGTTTGGGCCATGCTGTGTGCACGTTCTG
ATCTACAGGTTAGCCGACTTTTCACAGATGTCCAGGAACCCCTCCCCCAACATCCCGTACTCTTGGGTTTTTCTCTGTCC
TGGGAATTGGATTATGCCAATATTTTGCAGATGTTGGAGGACTTGGATATCCCATTGCGTAGTCAGCACCGCACAGCGGC
TCATCCCTTAGTGTTTGGGGGTGGGTCAGTGCTGACTGCTAATCCCGAACCCTTTGCTGATTTCTTTGATGTGATTCTGT
TGGGGGATGGAGAGGATCTACTGGGGCAGTTTATTGATACGTTTCGAACGGTACATCAAGCCGACCGTGCGACCCAACTG
TTGACCTTAGCCCAAGTGCCTGGGGTGTATATTCCCAGCTTGTATGAGGTTCAATACCAGGCATCGGAGGGTGCGATCGC
AACCATCAAACCCCACACTCCAGACGTGCCCGCCCAGGTCCAAAAACAGACCTATCGTGGCAATACCTTGTCCGCCTCAA
CGGTTGTTACCCCTAAAGCAGCTTGGGAAAGTATCTATATGGTGGAGGTGGTGCGGAGTTGCCCAGAAATGTGTCGTTTT
TGCCTGGCTAGCTATTTAACGCTCCCCTTTCGGACTCCAGAGGCGGCCCAAACGCTACTCCCCCAAATTGAAAAAGGACT
AGCTGTTACCAACCGTATTGGCCTCCTAGGAGCCTCTGTTACGCAACATCCAGAATTTGAGCAGCTGATCGACTATTTTG
CCCACCCTGACCGAGATCAGGTGCGTTTAAGTATTGCTTCCGTGCGGACCAATACTGTGACGGTCAAGCTCGCCCAGGTC
CTGGCTCAGCGGGATACTCGTTCGATTACCATTGCGATTGAAAGTGGCTCTGAGCGGTTGCGGCAGGTTATCAATAAGAA
ATTACAGAATGACGAGATTCACCAAGCGGCTGCCAATGCTTATCAAGGTCAACTGAAAGGCCTAAAACTTTATGGGATGG
TGGGTATTCCAGGGGAAACGGATACGGACGTTGAAGCGACGATTAATCTAATGTTGCAGTTAAAGAAAGAGGTGCCTGGG
TTGCGATTAACCTTAGGATGCAGCACCTTTGTCCCCAAAGCCCATACGCCTTTTCAGTGGTTTGGCGTCAACCCTACAGC
TAAGAAGTCGCTGCAATTGATGCAGAAGAAGTTGCGATCTCAAGGGATCGATTTTAGGCCTGAAAGCTACAACTGGTCAA
TTATTCAGGCCTTAATTGCTCGGGGTGATCGACGGATTTCTCATCTACTAGAACTGACTCGGCATTTTGGCGATTCCCTC
GGGAGCTATCGTCGAGCGTTTAAGCAACTTAAAGGGCAGATTCCTTCTCTAGACTTTTACGTTTTTCAGGAATGGCCAAC
AGATCAAATCTTGCCTTGGTCACACTTGCAAGGTCCTTTGCCACAATCCACCTTAGAAAAACATTTACACAATGCCACCG
ATTTGATGTAA

Upstream 100 bases:

>100_bases
TTACCTGAGAGTGTTGGAGAGATAACACATATGTAAAGATGTTTAAACCTAAATGCTGTTACATTAGCCTCTGCTAGACA
TCAAAGTGTCTCTAGTTTAA

Downstream 100 bases:

>100_bases
AGCATCAGACTCAATGCTCTGTTACATGAGTAGACTTGTTCAAAAAATTACAGCCCATAGTGCGTCTGGCTTTGAGCATG
GTTACTCTGACAGCAGACTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSTSIFQSEQLLFTPGTPTPNRLPLIFAFPNTYCVGITSLGFQVVWAMLCARSDLQVSRLFTDVQEPLPQHPVLLGFSLS
WELDYANILQMLEDLDIPLRSQHRTAAHPLVFGGGSVLTANPEPFADFFDVILLGDGEDLLGQFIDTFRTVHQADRATQL
LTLAQVPGVYIPSLYEVQYQASEGAIATIKPHTPDVPAQVQKQTYRGNTLSASTVVTPKAAWESIYMVEVVRSCPEMCRF
CLASYLTLPFRTPEAAQTLLPQIEKGLAVTNRIGLLGASVTQHPEFEQLIDYFAHPDRDQVRLSIASVRTNTVTVKLAQV
LAQRDTRSITIAIESGSERLRQVINKKLQNDEIHQAAANAYQGQLKGLKLYGMVGIPGETDTDVEATINLMLQLKKEVPG
LRLTLGCSTFVPKAHTPFQWFGVNPTAKKSLQLMQKKLRSQGIDFRPESYNWSIIQALIARGDRRISHLLELTRHFGDSL
GSYRRAFKQLKGQIPSLDFYVFQEWPTDQILPWSHLQGPLPQSTLEKHLHNATDLM

Sequences:

>Translated_536_residues
MSTSIFQSEQLLFTPGTPTPNRLPLIFAFPNTYCVGITSLGFQVVWAMLCARSDLQVSRLFTDVQEPLPQHPVLLGFSLS
WELDYANILQMLEDLDIPLRSQHRTAAHPLVFGGGSVLTANPEPFADFFDVILLGDGEDLLGQFIDTFRTVHQADRATQL
LTLAQVPGVYIPSLYEVQYQASEGAIATIKPHTPDVPAQVQKQTYRGNTLSASTVVTPKAAWESIYMVEVVRSCPEMCRF
CLASYLTLPFRTPEAAQTLLPQIEKGLAVTNRIGLLGASVTQHPEFEQLIDYFAHPDRDQVRLSIASVRTNTVTVKLAQV
LAQRDTRSITIAIESGSERLRQVINKKLQNDEIHQAAANAYQGQLKGLKLYGMVGIPGETDTDVEATINLMLQLKKEVPG
LRLTLGCSTFVPKAHTPFQWFGVNPTAKKSLQLMQKKLRSQGIDFRPESYNWSIIQALIARGDRRISHLLELTRHFGDSL
GSYRRAFKQLKGQIPSLDFYVFQEWPTDQILPWSHLQGPLPQSTLEKHLHNATDLM
>Mature_535_residues
STSIFQSEQLLFTPGTPTPNRLPLIFAFPNTYCVGITSLGFQVVWAMLCARSDLQVSRLFTDVQEPLPQHPVLLGFSLSW
ELDYANILQMLEDLDIPLRSQHRTAAHPLVFGGGSVLTANPEPFADFFDVILLGDGEDLLGQFIDTFRTVHQADRATQLL
TLAQVPGVYIPSLYEVQYQASEGAIATIKPHTPDVPAQVQKQTYRGNTLSASTVVTPKAAWESIYMVEVVRSCPEMCRFC
LASYLTLPFRTPEAAQTLLPQIEKGLAVTNRIGLLGASVTQHPEFEQLIDYFAHPDRDQVRLSIASVRTNTVTVKLAQVL
AQRDTRSITIAIESGSERLRQVINKKLQNDEIHQAAANAYQGQLKGLKLYGMVGIPGETDTDVEATINLMLQLKKEVPGL
RLTLGCSTFVPKAHTPFQWFGVNPTAKKSLQLMQKKLRSQGIDFRPESYNWSIIQALIARGDRRISHLLELTRHFGDSLG
SYRRAFKQLKGQIPSLDFYVFQEWPTDQILPWSHLQGPLPQSTLEKHLHNATDLM

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59949; Mature: 59817

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSIFQSEQLLFTPGTPTPNRLPLIFAFPNTYCVGITSLGFQVVWAMLCARSDLQVSRL
CCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHH
FTDVQEPLPQHPVLLGFSLSWELDYANILQMLEDLDIPLRSQHRTAAHPLVFGGGSVLTA
HHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEC
NPEPFADFFDVILLGDGEDLLGQFIDTFRTVHQADRATQLLTLAQVPGVYIPSLYEVQYQ
CCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
ASEGAIATIKPHTPDVPAQVQKQTYRGNTLSASTVVTPKAAWESIYMVEVVRSCPEMCRF
CCCCCEEEECCCCCCCCHHHHHHHHCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHHH
CLASYLTLPFRTPEAAQTLLPQIEKGLAVTNRIGLLGASVTQHPEFEQLIDYFAHPDRDQ
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
VRLSIASVRTNTVTVKLAQVLAQRDTRSITIAIESGSERLRQVINKKLQNDEIHQAAANA
EEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHH
YQGQLKGLKLYGMVGIPGETDTDVEATINLMLQLKKEVPGLRLTLGCSTFVPKAHTPFQW
HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEE
FGVNPTAKKSLQLMQKKLRSQGIDFRPESYNWSIIQALIARGDRRISHLLELTRHFGDSL
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GSYRRAFKQLKGQIPSLDFYVFQEWPTDQILPWSHLQGPLPQSTLEKHLHNATDLM
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSIFQSEQLLFTPGTPTPNRLPLIFAFPNTYCVGITSLGFQVVWAMLCARSDLQVSRL
CCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHH
FTDVQEPLPQHPVLLGFSLSWELDYANILQMLEDLDIPLRSQHRTAAHPLVFGGGSVLTA
HHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEC
NPEPFADFFDVILLGDGEDLLGQFIDTFRTVHQADRATQLLTLAQVPGVYIPSLYEVQYQ
CCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
ASEGAIATIKPHTPDVPAQVQKQTYRGNTLSASTVVTPKAAWESIYMVEVVRSCPEMCRF
CCCCCEEEECCCCCCCCHHHHHHHHCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHHH
CLASYLTLPFRTPEAAQTLLPQIEKGLAVTNRIGLLGASVTQHPEFEQLIDYFAHPDRDQ
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
VRLSIASVRTNTVTVKLAQVLAQRDTRSITIAIESGSERLRQVINKKLQNDEIHQAAANA
EEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHH
YQGQLKGLKLYGMVGIPGETDTDVEATINLMLQLKKEVPGLRLTLGCSTFVPKAHTPFQW
HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEE
FGVNPTAKKSLQLMQKKLRSQGIDFRPESYNWSIIQALIARGDRRISHLLELTRHFGDSL
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GSYRRAFKQLKGQIPSLDFYVFQEWPTDQILPWSHLQGPLPQSTLEKHLHNATDLM
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]