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The map label for this gene is 158335384

Identifier: 158335384

GI number: 158335384

Start: 2238216

End: 2239301

Strand: Direct

Name: 158335384

Synonym: AM1_2229

Alternate gene names: NA

Gene position: 2238216-2239301 (Clockwise)

Preceding gene: 158335383

Following gene: 158335385

Centisome position: 34.41

GC content: 55.16

Gene sequence:

>1086_bases
ATGGACAAACAACATCTAATTACTGAACTGCAATCGAACGGACTGCAGGTGATTGCCCCCAGTATTGGCGTAGCGGGTCG
TCGGGGTGGGGCCGGTCCCTCGGATCATAAAGCGGTGACGGTGGATGGGACGACGGTGATGGTTCCGATTTATACGGGAA
CCGCCAGCCAGTCCCCCTATACCGCCCAGGTGAATCAAGGCCGGCAAGCGGTGTTAGAGAAAGCCGACCAGGCCGTGGCC
ACGGTGGAATTTCCTCGGCAACCCCAGTTTTACCAACTACAAACGGCAGAGGGCATTCCCTACTGGAAGATTGCCCTCCT
CCATAGCCATGACGTGTTGGCCACCACGGTATTGCAAACCTGTATGCGGTATCGCGATCCTGATACGGCCTGCCAGTTTT
GTGCCATTGAAAAGTCCCTAGAGGCGGATCGGACCATTGCTCGCAAAACACCGGAACAACTAGCAGAAGTGGCGGAAGCA
GCAGTGCGCCTGGACGGGGTCCAGCATATGATTATGACCACCGGGACGCCCAATACCCGCGATCGCGGAGCTGCCTACTT
AGCCGAATGTGCCCAAGCCATTAAAGCTCGGGTCAACCTACCGATTCAGGCCCAATGCGAACCCCCGGATGGTTTTGGCT
GGTTTGCCCAGATGAAGGCGGCAGGTATCGACAGTTTGGGAATGCACCTAGAAGCCGTCGATCCACAGGTGCGATCGCAA
ATCATGCCCGGTAAAGCCGAAGTCCCCCTATCCCATTACTTTGAAGCCTTTGATGCCGCAGTACAGGTATTTGGCTGGGG
TCAAGTTTCCACCTATTTATTGGCTGGACTGGGCGATAGCCTGGACACGCTGGTGGAGGCTTCACAACGACTTATTGATT
TGGGGGTATATCCCTTTGTTGTGCCCTTTGTCCCTATTTCCAGTACCCCCTTAGCCAATCATCCCGCCCCCAGCAGCGAG
TTTATGTTTACCCTCTATCAGCAGGTGGGGGCGATGCTCAAACAAGCGGGCATGTCCTCGGCAGATATCAATGCAGGATG
TGCCAAGTGTGGGGCCTGTTCCGCTTTGTCTACGTTTGAAGCTTAA

Upstream 100 bases:

>100_bases
GTGGGCCGTAATGCAATCGGCTCCCACCGTACCGCTCCCAGAGCAGGATTCTCCCTTATCCAGTGAGCCCATCCCTCACC
CCGTCGATTAACCCAAGATT

Downstream 100 bases:

>100_bases
TTTTTAGAGGGTTTATGCCAGCAATCCCCCGATTGCTAGGTAGTACTATTTAGCAGCACAGAGGTATCTGATGGCATCCA
GTCGATATTGCTTTAAGTTG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Elongator /MiaB/NifB; Biotin Synthase-Related; Lipoic Acid Synthetase; Oxidoreductase; Iron-Molybdenum Cofactorbiosynthesis Nitrogenase NifB; Radical SAM Family Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MDKQHLITELQSNGLQVIAPSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPYTAQVNQGRQAVLEKADQAVA
TVEFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQTCMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEA
AVRLDGVQHMIMTTGTPNTRDRGAAYLAECAQAIKARVNLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ
IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFVVPFVPISSTPLANHPAPSSE
FMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFEA

Sequences:

>Translated_361_residues
MDKQHLITELQSNGLQVIAPSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPYTAQVNQGRQAVLEKADQAVA
TVEFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQTCMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEA
AVRLDGVQHMIMTTGTPNTRDRGAAYLAECAQAIKARVNLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ
IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFVVPFVPISSTPLANHPAPSSE
FMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFEA
>Mature_361_residues
MDKQHLITELQSNGLQVIAPSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPYTAQVNQGRQAVLEKADQAVA
TVEFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQTCMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEA
AVRLDGVQHMIMTTGTPNTRDRGAAYLAECAQAIKARVNLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ
IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFVVPFVPISSTPLANHPAPSSE
FMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFEA

Specific function: Unknown

COG id: COG2516

COG function: function code R; Biotin synthase-related enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38721; Mature: 38721

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQHLITELQSNGLQVIAPSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPY
CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCC
TAQVNQGRQAVLEKADQAVATVEFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQT
EEHHHCHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH
CMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEAAVRLDGVQHMIMTTGTPNTR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHEEEEECCCCCCC
DRGAAYLAECAQAIKARVNLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCHHCCEEECCCHHHHHH
IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFV
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
VPFVPISSTPLANHPAPSSEFMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHCC
A
C
>Mature Secondary Structure
MDKQHLITELQSNGLQVIAPSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPY
CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCC
TAQVNQGRQAVLEKADQAVATVEFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQT
EEHHHCHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH
CMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEAAVRLDGVQHMIMTTGTPNTR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHEEEEECCCCCCC
DRGAAYLAECAQAIKARVNLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCHHCCEEECCCHHHHHH
IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFV
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
VPFVPISSTPLANHPAPSSEFMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA