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The map label for this gene is dppA [C]

Identifier: 158335241

GI number: 158335241

Start: 2076451

End: 2078205

Strand: Reverse

Name: dppA [C]

Synonym: AM1_2084

Alternate gene names: 158335241

Gene position: 2078205-2076451 (Counterclockwise)

Preceding gene: 158335242

Following gene: 158335240

Centisome position: 31.95

GC content: 48.03

Gene sequence:

>1755_bases
ATGGCTTTTCTGCGACGATGGGTGGCTTGGAGTTTGGTATTGGTAGTTGCGATCGCACTCCCTGGCTGTAGCCTCTCCCA
ATTCAAAACCCAAACGGCACGGGTCCCCCAGTATGTCGATACCCTACTGAGTGCCCCTAAAACGTTTAATTCCACGCAAA
GTAAAGAAGCCAACAACGTCTTCGGCTTAATCTATGAAGGATTAACAACCCAGAATGGTCTAACAGGTGAGATTGAGCCT
GCCCTGGCAGAGTCTTGGGAATTCTCTGCCGATAAACTCAAAATTATCTTTACCCTCCGACCGAATCTGAAATGGTCAGA
CGGGACTCCATTGACGGCGGATGATGTTGTTTTTTCCTATAACGATGTCTATCTGAATGAGGCCATTCCCACGGATACTC
GCGATGTTCTTCGGGTTGGTAAAAATCGGGCCTTGCCCAAGGTCAGAAAACTAGATGACCAGCGAGTGGAGTTTTCGATT
CCTGAACCCTTCGCCCCGTTTTTGCGAACGGCAGGCGCAATCAGCATTCTGCCTGCTCATGCCCTCAAGAAATTGGTGGA
TACACCAGATAGCAAAGGCAATCCTCAGTTTATTTCGGCTTGGGGTGTGGATACAGACCCCAAAGAAATTATCGTCAACG
GTCCCTATCAACTGGAACGCTACGAAACCAATCAACGGGTTGTGTTTCGACGCAACCCCAATTATTGGCGCTATCAAATT
CCGGGTCGAGCGAACGGTAACATTGAGCGCATTATCTGGAAAATTGTTGAATCCCCTGATACGGCCTTACTGCAGTTCCG
CACCGGGGGCTTAGACTCAGTGGGGGTGCGGGCCAGTACGTTTTCTCTTTTAAAGCGGGAAGAAAAGTCTGGAAACTTTA
CCATCTATGAAGGCGGGCCCGATTTTGGTACAACCTTCGTTTTCTTTAACCTCAATCGGGGCCGCAGAAATAATAAGCCC
CTAGTCAATCCCATCAAATCCCGATGGTTTAACAACGTTAAATTTCGGCAGGCAGTGGCCTATGCCATTGATCGGGAACG
GATTCTCGCCAATACTTACCAAGGCTTAGGCTTGACCCAGAATTCTCCCATCTCTGTACAAAGCCCGTATTACCTGCCCC
CAGAAGAGGGGCTGAAGGTATACGACTATGATCTCCAGAAATCCAAACAGTTACTCCAAGACGCGGGCTTTAAAACGAAC
AAACAAGGACAGCTTTTGGATGATCAGGGTAACAAAGTCCGCTTTACGCTGATGGCACCCGCAGGCAGTACCTTAGGTGC
TCAGATTAAACAGGACTTATCCAAAGTTGGTATGAAGGTGGACTATACCCCCATCGCCTTCAACACAATGGTGGATAAAT
TAGATGACTCCCTCGATTGGGATTGCGCCTTGTTGGGGTTGACTGGCAGTTTGGAGCCAAATACTGGCGCGAATGTCTGG
TCCCCAGAAGGGGGATTGCATATGTTTAACCAAAAACCTCAGCCTCCTAGTGAGCCGATTCAAGGCTTTACCGTGAGTGA
CTGGGAGCAAGAGATAGCCGATCTCTATATCGAAGGAGCCCAGGAATTAGATGAGGCCAAACGGAAAGCCATTTATGCCA
AAACTCAACAAATTGCTCAGGAACACTTGCCCTTTATATACTTAATAAATCCGTTGGCCCTAGCAGCCGTTCGTAATAAC
TTTGAAGGAACCCAATATACGGCATTGGGGAAAGTCACTTGGAATATTCACGATATTCGGGATGTTGGTGAATGA

Upstream 100 bases:

>100_bases
AAAGTACTCCTGCTGCTGACCCGACTTAAACTCCCTTGGCATTTCCAACAGACTTGTACGCTACCATCAGACTCAGCGTT
AAACGTTGGCTGTGAACTGT

Downstream 100 bases:

>100_bases
CCTGAGTGCTTTGAAGAGGGACTCCGAAGACCCAAAGGAGGGGGTTCGAATCAAAAAGACAGTATCAGTATCGGGTTAGC
CGGGCCTCAAACTCGCTACA

Product: oligopeptide ABC transporter periplasmic oligopeptide-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MAFLRRWVAWSLVLVVAIALPGCSLSQFKTQTARVPQYVDTLLSAPKTFNSTQSKEANNVFGLIYEGLTTQNGLTGEIEP
ALAESWEFSADKLKIIFTLRPNLKWSDGTPLTADDVVFSYNDVYLNEAIPTDTRDVLRVGKNRALPKVRKLDDQRVEFSI
PEPFAPFLRTAGAISILPAHALKKLVDTPDSKGNPQFISAWGVDTDPKEIIVNGPYQLERYETNQRVVFRRNPNYWRYQI
PGRANGNIERIIWKIVESPDTALLQFRTGGLDSVGVRASTFSLLKREEKSGNFTIYEGGPDFGTTFVFFNLNRGRRNNKP
LVNPIKSRWFNNVKFRQAVAYAIDRERILANTYQGLGLTQNSPISVQSPYYLPPEEGLKVYDYDLQKSKQLLQDAGFKTN
KQGQLLDDQGNKVRFTLMAPAGSTLGAQIKQDLSKVGMKVDYTPIAFNTMVDKLDDSLDWDCALLGLTGSLEPNTGANVW
SPEGGLHMFNQKPQPPSEPIQGFTVSDWEQEIADLYIEGAQELDEAKRKAIYAKTQQIAQEHLPFIYLINPLALAAVRNN
FEGTQYTALGKVTWNIHDIRDVGE

Sequences:

>Translated_584_residues
MAFLRRWVAWSLVLVVAIALPGCSLSQFKTQTARVPQYVDTLLSAPKTFNSTQSKEANNVFGLIYEGLTTQNGLTGEIEP
ALAESWEFSADKLKIIFTLRPNLKWSDGTPLTADDVVFSYNDVYLNEAIPTDTRDVLRVGKNRALPKVRKLDDQRVEFSI
PEPFAPFLRTAGAISILPAHALKKLVDTPDSKGNPQFISAWGVDTDPKEIIVNGPYQLERYETNQRVVFRRNPNYWRYQI
PGRANGNIERIIWKIVESPDTALLQFRTGGLDSVGVRASTFSLLKREEKSGNFTIYEGGPDFGTTFVFFNLNRGRRNNKP
LVNPIKSRWFNNVKFRQAVAYAIDRERILANTYQGLGLTQNSPISVQSPYYLPPEEGLKVYDYDLQKSKQLLQDAGFKTN
KQGQLLDDQGNKVRFTLMAPAGSTLGAQIKQDLSKVGMKVDYTPIAFNTMVDKLDDSLDWDCALLGLTGSLEPNTGANVW
SPEGGLHMFNQKPQPPSEPIQGFTVSDWEQEIADLYIEGAQELDEAKRKAIYAKTQQIAQEHLPFIYLINPLALAAVRNN
FEGTQYTALGKVTWNIHDIRDVGE
>Mature_583_residues
AFLRRWVAWSLVLVVAIALPGCSLSQFKTQTARVPQYVDTLLSAPKTFNSTQSKEANNVFGLIYEGLTTQNGLTGEIEPA
LAESWEFSADKLKIIFTLRPNLKWSDGTPLTADDVVFSYNDVYLNEAIPTDTRDVLRVGKNRALPKVRKLDDQRVEFSIP
EPFAPFLRTAGAISILPAHALKKLVDTPDSKGNPQFISAWGVDTDPKEIIVNGPYQLERYETNQRVVFRRNPNYWRYQIP
GRANGNIERIIWKIVESPDTALLQFRTGGLDSVGVRASTFSLLKREEKSGNFTIYEGGPDFGTTFVFFNLNRGRRNNKPL
VNPIKSRWFNNVKFRQAVAYAIDRERILANTYQGLGLTQNSPISVQSPYYLPPEEGLKVYDYDLQKSKQLLQDAGFKTNK
QGQLLDDQGNKVRFTLMAPAGSTLGAQIKQDLSKVGMKVDYTPIAFNTMVDKLDDSLDWDCALLGLTGSLEPNTGANVWS
PEGGLHMFNQKPQPPSEPIQGFTVSDWEQEIADLYIEGAQELDEAKRKAIYAKTQQIAQEHLPFIYLINPLALAAVRNNF
EGTQYTALGKVTWNIHDIRDVGE

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=542, Percent_Identity=24.5387453874539, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1787495, Length=521, Percent_Identity=24.9520153550864, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1787762, Length=514, Percent_Identity=23.7354085603113, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789397, Length=400, Percent_Identity=24.5, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787052, Length=538, Percent_Identity=21.5613382899628, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787551, Length=369, Percent_Identity=23.8482384823848, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081878, Length=306, Percent_Identity=23.8562091503268, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65613; Mature: 65482

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLRRWVAWSLVLVVAIALPGCSLSQFKTQTARVPQYVDTLLSAPKTFNSTQSKEANNV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCE
FGLIYEGLTTQNGLTGEIEPALAESWEFSADKLKIIFTLRPNLKWSDGTPLTADDVVFSY
EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCCCEEEEE
NDVYLNEAIPTDTRDVLRVGKNRALPKVRKLDDQRVEFSIPEPFAPFLRTAGAISILPAH
CCEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCHHHHHHHCCCCEEHHHH
ALKKLVDTPDSKGNPQFISAWGVDTDPKEIIVNGPYQLERYETNQRVVFRRNPNYWRYQI
HHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCEEEEEC
PGRANGNIERIIWKIVESPDTALLQFRTGGLDSVGVRASTFSLLKREEKSGNFTIYEGGP
CCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
DFGTTFVFFNLNRGRRNNKPLVNPIKSRWFNNVKFRQAVAYAIDRERILANTYQGLGLTQ
CCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSPISVQSPYYLPPEEGLKVYDYDLQKSKQLLQDAGFKTNKQGQLLDDQGNKVRFTLMAP
CCCEEECCCCCCCHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECC
AGSTLGAQIKQDLSKVGMKVDYTPIAFNTMVDKLDDSLDWDCALLGLTGSLEPNTGANVW
CCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
SPEGGLHMFNQKPQPPSEPIQGFTVSDWEQEIADLYIEGAQELDEAKRKAIYAKTQQIAQ
CCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
EHLPFIYLINPLALAAVRNNFEGTQYTALGKVTWNIHDIRDVGE
HCCCEEEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEHHHCCCC
>Mature Secondary Structure 
AFLRRWVAWSLVLVVAIALPGCSLSQFKTQTARVPQYVDTLLSAPKTFNSTQSKEANNV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCE
FGLIYEGLTTQNGLTGEIEPALAESWEFSADKLKIIFTLRPNLKWSDGTPLTADDVVFSY
EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCCCEEEEE
NDVYLNEAIPTDTRDVLRVGKNRALPKVRKLDDQRVEFSIPEPFAPFLRTAGAISILPAH
CCEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCHHHHHHHCCCCEEHHHH
ALKKLVDTPDSKGNPQFISAWGVDTDPKEIIVNGPYQLERYETNQRVVFRRNPNYWRYQI
HHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCEEEEEC
PGRANGNIERIIWKIVESPDTALLQFRTGGLDSVGVRASTFSLLKREEKSGNFTIYEGGP
CCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
DFGTTFVFFNLNRGRRNNKPLVNPIKSRWFNNVKFRQAVAYAIDRERILANTYQGLGLTQ
CCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSPISVQSPYYLPPEEGLKVYDYDLQKSKQLLQDAGFKTNKQGQLLDDQGNKVRFTLMAP
CCCEEECCCCCCCHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECC
AGSTLGAQIKQDLSKVGMKVDYTPIAFNTMVDKLDDSLDWDCALLGLTGSLEPNTGANVW
CCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
SPEGGLHMFNQKPQPPSEPIQGFTVSDWEQEIADLYIEGAQELDEAKRKAIYAKTQQIAQ
CCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
EHLPFIYLINPLALAAVRNNFEGTQYTALGKVTWNIHDIRDVGE
HCCCEEEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]