Click here to switch to the map view.

The map label for this gene is psbM

Identifier: 158335181

GI number: 158335181

Start: 2015226

End: 2015330

Strand: Reverse

Name: psbM

Synonym: AM1_2024

Alternate gene names: 158335181

Gene position: 2015330-2015226 (Counterclockwise)

Preceding gene: 158335182

Following gene: 158335177

Centisome position: 30.99

GC content: 43.81

Gene sequence:

>105_bases
ATGCCAGTTAATGATTTAGGTGCAATTGCTACCGCTTTATTCGTCTTCATACCTTGTGTGTTTCTGATTCTTCTCTATGC
TCAAACCGCTAGCCGGGGAAGCTAG

Upstream 100 bases:

>100_bases
GTGTTGTTCAAGTAGGTATTGATAAATCTTTCCAAAGAGGTTTAGCAAAAATGGTATTGTAAAGTTTATAAATGCCCAGA
TGAGATAGAGATTAATTCCT

Downstream 100 bases:

>100_bases
TCAAGAATCCTTGCACGATATTTGAAAGGATGATTGAGAGTACCTAGTTATCGTTAACTAGGTACTTTTGTGCGGGTTTC
TCGTTCATAACTAAGACGAT

Product: photosystem II protein PsbM

Products: NA

Alternate protein names: PSII-M

Number of amino acids: Translated: 34; Mature: 33

Protein sequence:

>34_residues
MPVNDLGAIATALFVFIPCVFLILLYAQTASRGS

Sequences:

>Translated_34_residues
MPVNDLGAIATALFVFIPCVFLILLYAQTASRGS
>Mature_33_residues
PVNDLGAIATALFVFIPCVFLILLYAQTASRGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBM_ACAM1 (B0CFM0)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001516353.1
- ProteinModelPortal:   B0CFM0
- SMR:   B0CFM0
- GeneID:   5680838
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_2024
- HOGENOM:   HBG439285
- BioCyc:   AMAR329726:AM1_2024-MONOMER
- HAMAP:   MF_00438
- InterPro:   IPR007826
- TIGRFAMs:   TIGR03038

Pfam domain/function: PF05151 PsbM

EC number: NA

Molecular weight: Translated: 3613; Mature: 3482

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xddd2168)-;

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVNDLGAIATALFVFIPCVFLILLYAQTASRGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
PVNDLGAIATALFVFIPCVFLILLYAQTASRGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA