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The map label for this gene is ygxB [H]

Identifier: 158335176

GI number: 158335176

Start: 2007789

End: 2009417

Strand: Direct

Name: ygxB [H]

Synonym: AM1_2019

Alternate gene names: 158335176

Gene position: 2007789-2009417 (Clockwise)

Preceding gene: 158335174

Following gene: 158335178

Centisome position: 30.87

GC content: 48.37

Gene sequence:

>1629_bases
ATGGATGCCTTCTTAAATATATTCACCAACCCGTTGGTGACATCAGTTAACACGAGCAGCCTCATATTAGGTCAAGCTGC
TTCTAACCCCTTGGACACAATCACAAATGGGGTGAGTCAATCACTGCCTGCAATCATTGGGGCAGCCGCTTTTCTGATTA
TTGGTGTCATCGTCGCCTATTTCGTTAAGTGGTTTGTGCAAGCCCTTCTGTCCAAAACAGATATCGATAACCGTATCGCC
CGCTGGTTATCGGGTTCTGGTGACTCACGTGTGGCGGCCAACGTTGAGAAACTGATTGGATCGATCGTTTTTTGGATCGT
CGTCCTCATTGCAGTGGTCGGCGCTCTAGATTCCTTAAAACTCGAAAATATCTCTGCCCCTCTTAATAACCTCCTCAGTA
AAGTCTTGGGGTATCTCCCCCAAATTGGAGGAGCCATCGCTTTGATGGGAGTGGCATGGATTATCGCCACACTGGTCAAG
ATGGTTGTGATCAGGGTCCTACAATCCTTATCAATTGATGAGCGATTAAGTGCAGCATCTGGTCCGGAAGATGCCAGTGG
ACAGCAGCCTATCTCCATCAGCGAAACCCTAGGCAACACCATTTACTGGTTTATCTTCCTGCTGTTCCTCCTCCCCATTT
TAGAAACCCTAAAATTGCAAGGGCCATTACAGCCTGTACAGGCAATGGTTCAAGACATTTTGGAAGTTTTACCTAATGTC
TTGGGTGCTGTTCTGATTGGCGTAGCTGGCTGGTTTGTAGCCCGTATTGTTCGCATGATCGTTACCAATTTGCTAACAGC
GAGCGGGGCCGATCGATGGGGGCAACAACTCGGTTTAACGCAAGCCATTGGTGGTCAGAGCCTCTCTACTTTGGCAGGCA
GCGTTGTATACGTCTTTATCCTCATCCCATTCGCAATTTCTGCCTTTCAAGCTTTAGGGATTGCGGCTATTTCTGAACCT
GCCGTTGAAATGTTGCGGGATGTCCTGAGAACAATCCCTCGCATCTTCACAGCTGCCGTCATTTTGGGTGTGGCTTACAT
CCTTGGAAAAATTGTGGGCGACTTGGTTTCTGGTTTGCTCGCCAATTTTGGATTCAACAATATCTTTCAAATTTTGGGAC
TCCAAGCAGCCCAAGAACCCACAGATAGCATTTCTGAAGATGGCCCCATCAACACGTCTTCTGGTAAAACTCCCTCTGAG
ATCGCTGGAATCGTCGTTTTGGTCGGCACCATCTTAGTCTTCTTAATCCCTGCCACGGATGTTCTTCAATTCCAACCCCT
AACTGGCGTTATTACTGAACTCCTCAGGATTTTGGCCCAAGTTCTAGTCGGGGTATTGGTGTTTGGAATTGGTCTCTACC
TGGCCAATATGACCTTCAATATTGTCTCCAGCTCTGGCGGAGCCCAAGCTCGCATGGTCGCTCAAGCGGCCCGAGTCGCC
ATTATCGCTTTAGTGTCCGCAATGGCTCTACAACAAATGGGCATTGCCACGAATATTGTCAACCTAGCCTTCGGTCTCCT
ATTGGGTGCCATTGCAGTTGCCTTAGCACTGGCATTTGGCTTTGGCGGTATGGACATCGCTGGGGAACAAGTGCGTAAAT
GGCTGAATAATTTCGAATCACGGCGCTAA

Upstream 100 bases:

>100_bases
TATGTTTGCTTTGTACATATAAATGGCATAACGAAATTTTTCTTGAACCAGGTTCCAAATGGTTCCCTATTGCAGATATT
GAACTTAGAGCTAGAAATCA

Downstream 100 bases:

>100_bases
ACCGTAAATTTAGTCATCCCAACATCTACAAAAGCCCCGCTGAGTTAATCAGCGGGGCTTTTGTAGATGTCAATATCTAT
GCTAAAACTCAGCATTCAAG

Product: TM helix repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MDAFLNIFTNPLVTSVNTSSLILGQAASNPLDTITNGVSQSLPAIIGAAAFLIIGVIVAYFVKWFVQALLSKTDIDNRIA
RWLSGSGDSRVAANVEKLIGSIVFWIVVLIAVVGALDSLKLENISAPLNNLLSKVLGYLPQIGGAIALMGVAWIIATLVK
MVVIRVLQSLSIDERLSAASGPEDASGQQPISISETLGNTIYWFIFLLFLLPILETLKLQGPLQPVQAMVQDILEVLPNV
LGAVLIGVAGWFVARIVRMIVTNLLTASGADRWGQQLGLTQAIGGQSLSTLAGSVVYVFILIPFAISAFQALGIAAISEP
AVEMLRDVLRTIPRIFTAAVILGVAYILGKIVGDLVSGLLANFGFNNIFQILGLQAAQEPTDSISEDGPINTSSGKTPSE
IAGIVVLVGTILVFLIPATDVLQFQPLTGVITELLRILAQVLVGVLVFGIGLYLANMTFNIVSSSGGAQARMVAQAARVA
IIALVSAMALQQMGIATNIVNLAFGLLLGAIAVALALAFGFGGMDIAGEQVRKWLNNFESRR

Sequences:

>Translated_542_residues
MDAFLNIFTNPLVTSVNTSSLILGQAASNPLDTITNGVSQSLPAIIGAAAFLIIGVIVAYFVKWFVQALLSKTDIDNRIA
RWLSGSGDSRVAANVEKLIGSIVFWIVVLIAVVGALDSLKLENISAPLNNLLSKVLGYLPQIGGAIALMGVAWIIATLVK
MVVIRVLQSLSIDERLSAASGPEDASGQQPISISETLGNTIYWFIFLLFLLPILETLKLQGPLQPVQAMVQDILEVLPNV
LGAVLIGVAGWFVARIVRMIVTNLLTASGADRWGQQLGLTQAIGGQSLSTLAGSVVYVFILIPFAISAFQALGIAAISEP
AVEMLRDVLRTIPRIFTAAVILGVAYILGKIVGDLVSGLLANFGFNNIFQILGLQAAQEPTDSISEDGPINTSSGKTPSE
IAGIVVLVGTILVFLIPATDVLQFQPLTGVITELLRILAQVLVGVLVFGIGLYLANMTFNIVSSSGGAQARMVAQAARVA
IIALVSAMALQQMGIATNIVNLAFGLLLGAIAVALALAFGFGGMDIAGEQVRKWLNNFESRR
>Mature_542_residues
MDAFLNIFTNPLVTSVNTSSLILGQAASNPLDTITNGVSQSLPAIIGAAAFLIIGVIVAYFVKWFVQALLSKTDIDNRIA
RWLSGSGDSRVAANVEKLIGSIVFWIVVLIAVVGALDSLKLENISAPLNNLLSKVLGYLPQIGGAIALMGVAWIIATLVK
MVVIRVLQSLSIDERLSAASGPEDASGQQPISISETLGNTIYWFIFLLFLLPILETLKLQGPLQPVQAMVQDILEVLPNV
LGAVLIGVAGWFVARIVRMIVTNLLTASGADRWGQQLGLTQAIGGQSLSTLAGSVVYVFILIPFAISAFQALGIAAISEP
AVEMLRDVLRTIPRIFTAAVILGVAYILGKIVGDLVSGLLANFGFNNIFQILGLQAAQEPTDSISEDGPINTSSGKTPSE
IAGIVVLVGTILVFLIPATDVLQFQPLTGVITELLRILAQVLVGVLVFGIGLYLANMTFNIVSSSGGAQARMVAQAARVA
IIALVSAMALQQMGIATNIVNLAFGLLLGAIAVALALAFGFGGMDIAGEQVRKWLNNFESRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 57093; Mature: 57093

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]