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The map label for this gene is 158335159

Identifier: 158335159

GI number: 158335159

Start: 1992072

End: 1992614

Strand: Direct

Name: 158335159

Synonym: AM1_2002

Alternate gene names: NA

Gene position: 1992072-1992614 (Clockwise)

Preceding gene: 158335157

Following gene: 158335160

Centisome position: 30.63

GC content: 48.99

Gene sequence:

>543_bases
TTGCCATTTTTAGACCGATGTCTCATGGGTCAAACCTCCTTCCACGGAATCGATCTAGCAGAAGTTCACTTAGATGGCGT
GGTCCTTAAATACCTGGACTTAACTGCTGTAAATATGCAGGCAGCCAGTCTACAGCGAGCTAACCTACAACGATCTATTC
TCACCGCTGGATGCTTAGACCAGGCAAATATGCAGGGATGTTACCTCTACCGTAGCCACTTGGAAAGGGCTTCGATGCAA
CAAGTCCAGTTACAGCGAGCCAATTTATCCCATGCTTACTTGAGGGGGGCCAATCTCCAGGGAGCGAATCTCCACCAAGC
TCAACTGATGGGCACCGATCTTCGGGACGCTAATCTCACGGATTGTCTACTCCAAGATGCGAATTGTAAAAGTGCCCTCT
ACAGTGCCAACACTCAATTTAGTCCATCTTTCGATCCAGTCCTTGCAGGCATGAAACTATGGACAGCAAAAACCTTGGTC
AACTACAGCCACCAACGGGTGAGGGGGCAGAGAAATTGGGATTGGGGCTGGCAATGTTCGTAA

Upstream 100 bases:

>100_bases
AAAAGCAGCCAGCCGGGAATGCTGAAACTGAGACTTCCTTACTGCTTTTACCTCAGAATTGATGAATATCAGCATCTCAG
ACTCATTTTTAAGCAAAGGA

Downstream 100 bases:

>100_bases
TCCTCATTTAATGTCACCACTACCCCGGTCGGGGTAGGTTAACGTTATAATTTTATTAAGAAATGTAACAAACCCATCTC
TCCCCCATGTCTAAGTCACC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPFLDRCLMGQTSFHGIDLAEVHLDGVVLKYLDLTAVNMQAASLQRANLQRSILTAGCLDQANMQGCYLYRSHLERASMQ
QVQLQRANLSHAYLRGANLQGANLHQAQLMGTDLRDANLTDCLLQDANCKSALYSANTQFSPSFDPVLAGMKLWTAKTLV
NYSHQRVRGQRNWDWGWQCS

Sequences:

>Translated_180_residues
MPFLDRCLMGQTSFHGIDLAEVHLDGVVLKYLDLTAVNMQAASLQRANLQRSILTAGCLDQANMQGCYLYRSHLERASMQ
QVQLQRANLSHAYLRGANLQGANLHQAQLMGTDLRDANLTDCLLQDANCKSALYSANTQFSPSFDPVLAGMKLWTAKTLV
NYSHQRVRGQRNWDWGWQCS
>Mature_179_residues
PFLDRCLMGQTSFHGIDLAEVHLDGVVLKYLDLTAVNMQAASLQRANLQRSILTAGCLDQANMQGCYLYRSHLERASMQQ
VQLQRANLSHAYLRGANLQGANLHQAQLMGTDLRDANLTDCLLQDANCKSALYSANTQFSPSFDPVLAGMKLWTAKTLVN
YSHQRVRGQRNWDWGWQCS

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=120, Percent_Identity=34.1666666666667, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 20205; Mature: 20074

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLDRCLMGQTSFHGIDLAEVHLDGVVLKYLDLTAVNMQAASLQRANLQRSILTAGCLD
CCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
QANMQGCYLYRSHLERASMQQVQLQRANLSHAYLRGANLQGANLHQAQLMGTDLRDANLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCHH
DCLLQDANCKSALYSANTQFSPSFDPVLAGMKLWTAKTLVNYSHQRVRGQRNWDWGWQCS
HHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PFLDRCLMGQTSFHGIDLAEVHLDGVVLKYLDLTAVNMQAASLQRANLQRSILTAGCLD
CCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
QANMQGCYLYRSHLERASMQQVQLQRANLSHAYLRGANLQGANLHQAQLMGTDLRDANLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCHH
DCLLQDANCKSALYSANTQFSPSFDPVLAGMKLWTAKTLVNYSHQRVRGQRNWDWGWQCS
HHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA