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The map label for this gene is crtN [H]

Identifier: 158335160

GI number: 158335160

Start: 1992701

End: 1994224

Strand: Direct

Name: crtN [H]

Synonym: AM1_2003

Alternate gene names: 158335160

Gene position: 1992701-1994224 (Clockwise)

Preceding gene: 158335159

Following gene: 158335161

Centisome position: 30.64

GC content: 53.28

Gene sequence:

>1524_bases
ATGTCTAAGTCACCCCACGAAACTGATGTCGTTGTCATTGGTGCAGGCATTGGTGGCTTAACGGCTGGAGCACTCTTAGC
GAAGCGCGGCTATCGCGTCAAAGTCTTCGACCAAGCCTGGGTGCCAGGGGGCTGCGCCTCTACCTTTAAACGGCGAGGGT
TCACCTTTGATGTGGGGGCAACCCAAGTAGCAGGTTTAGAACCTGGCGGCATCCATCATCGGATTTTTCAGGAATTAGGG
GTTGAGATCCCAACTGCAAGCCATTGTGATCCGGCATGCGCTGTCTTTTTGCCGGGAGAAACAGAGCCCATTTCTGTCTG
GCGAGACCCAGACCAATGGCAGGCAGAACGGGAAAAACACTTTCCCGGCAGTGACGGATTTTGGCAACTTCTGGCGAACC
TATTTCGCTATAACTGGGGGTTTCAATCCCGCGATCCGGTGATTCCCCCACGTAATCTCTGGGATGGCTGGCAGCTCTTA
CAAGCCGTGCGTCCCGATACCTTACTGACGGTTCCTCATCTATTTACAACGGTAGGGCAACTCCTCAGACTCACAGGTCT
CGGAAATCAACGCCGCTTAAAAACGTTTTTGGACCTCCAACTCAAGCTTTATTCCCAGGTGAATGCAGACCAGACTGCCT
TACTATATGCGGCAACGGCATTAGGCGTATCGCAAGCCCCTCAGGGCTTGTTTCATTTGCACGGCAGTATGCAGGTCCTG
AGCGATCGCATCGTCGAAGCCCTGAAAAAGCATGGCGGTGAACTGCATATGGGCCATAGCGTTGACCAAATTCAGGTGCA
TAGTCAGGAATTGTTAGGTGTATTAATCCGTCAGCAAAAAACAGGTGAGACTTGGACGGAATCGGCGGACCATGTGGTGG
CCAATGTAACAGTGCAAAACCTCGTCCGTTTGCTGGGAGAGGATGCCCCCAGACAGTATCAACAGCGAGTCAAAAAACTG
CCGCCCTCCTCTGGGGCCTTTGTGATTTATCTCGGGGTAGACGCGGCTGCCATTCCCGAGAACTGCCCGCCCCATCTGCA
GTTTCTCTATGACTATGACGGCCCCATTGGCGAGAATAACTCCCTATTTGTATCCGTCAGCCGACCGGGGGATGGCCGCG
CCCCCGAGGGCAAAGCCACGATCATCGCGTCTTCTTTTACAGATCCAAAGTTGTGGGATGAAGCCGAGGATTATGATGCG
CTGAAGCAGGAGTATACGGAGGGTGCGATCGCACGTCTGAGTCAATACTTCCACCTTACTTCAGACACCATCATTCACCA
AGAAGCAGCAACCCCCAGAACCTTTGCCCACTTTACAGGTCGTAGCCAAGGCATAGTCGGGGGCATCGGTCAGCGTCTAT
CTACCTTTGGCCCTTTTGGATTTGCAACACGGACTCCGATTAAGCGGTTATGGCTAGTCGGGGATTCAACTCATCCCGGC
GAAGGCACGGCAGGAGTGAGCTATTCTGCCTTGACTGCCGTCAATCAATTGATGGCAATGGACGGTACACTCTCGATGGA
GTAG

Upstream 100 bases:

>100_bases
GGCAATGTTCGTAATCCTCATTTAATGTCACCACTACCCCGGTCGGGGTAGGTTAACGTTATAATTTTATTAAGAAATGT
AACAAACCCATCTCTCCCCC

Downstream 100 bases:

>100_bases
TCATTTCGGCTCTCTCAATCTGTCTTAGCTGTTATATATGTCAGAGTGGAGAGAGCAACGGTAGCCATCATGACCAGCCT
ACAGAAGCCCACTACATCCC

Product: amine oxidase

Products: NA

Alternate protein names: 4,4'-diapophytoene desaturase; Diapophytoene desaturase [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MSKSPHETDVVVIGAGIGGLTAGALLAKRGYRVKVFDQAWVPGGCASTFKRRGFTFDVGATQVAGLEPGGIHHRIFQELG
VEIPTASHCDPACAVFLPGETEPISVWRDPDQWQAEREKHFPGSDGFWQLLANLFRYNWGFQSRDPVIPPRNLWDGWQLL
QAVRPDTLLTVPHLFTTVGQLLRLTGLGNQRRLKTFLDLQLKLYSQVNADQTALLYAATALGVSQAPQGLFHLHGSMQVL
SDRIVEALKKHGGELHMGHSVDQIQVHSQELLGVLIRQQKTGETWTESADHVVANVTVQNLVRLLGEDAPRQYQQRVKKL
PPSSGAFVIYLGVDAAAIPENCPPHLQFLYDYDGPIGENNSLFVSVSRPGDGRAPEGKATIIASSFTDPKLWDEAEDYDA
LKQEYTEGAIARLSQYFHLTSDTIIHQEAATPRTFAHFTGRSQGIVGGIGQRLSTFGPFGFATRTPIKRLWLVGDSTHPG
EGTAGVSYSALTAVNQLMAMDGTLSME

Sequences:

>Translated_507_residues
MSKSPHETDVVVIGAGIGGLTAGALLAKRGYRVKVFDQAWVPGGCASTFKRRGFTFDVGATQVAGLEPGGIHHRIFQELG
VEIPTASHCDPACAVFLPGETEPISVWRDPDQWQAEREKHFPGSDGFWQLLANLFRYNWGFQSRDPVIPPRNLWDGWQLL
QAVRPDTLLTVPHLFTTVGQLLRLTGLGNQRRLKTFLDLQLKLYSQVNADQTALLYAATALGVSQAPQGLFHLHGSMQVL
SDRIVEALKKHGGELHMGHSVDQIQVHSQELLGVLIRQQKTGETWTESADHVVANVTVQNLVRLLGEDAPRQYQQRVKKL
PPSSGAFVIYLGVDAAAIPENCPPHLQFLYDYDGPIGENNSLFVSVSRPGDGRAPEGKATIIASSFTDPKLWDEAEDYDA
LKQEYTEGAIARLSQYFHLTSDTIIHQEAATPRTFAHFTGRSQGIVGGIGQRLSTFGPFGFATRTPIKRLWLVGDSTHPG
EGTAGVSYSALTAVNQLMAMDGTLSME
>Mature_506_residues
SKSPHETDVVVIGAGIGGLTAGALLAKRGYRVKVFDQAWVPGGCASTFKRRGFTFDVGATQVAGLEPGGIHHRIFQELGV
EIPTASHCDPACAVFLPGETEPISVWRDPDQWQAEREKHFPGSDGFWQLLANLFRYNWGFQSRDPVIPPRNLWDGWQLLQ
AVRPDTLLTVPHLFTTVGQLLRLTGLGNQRRLKTFLDLQLKLYSQVNADQTALLYAATALGVSQAPQGLFHLHGSMQVLS
DRIVEALKKHGGELHMGHSVDQIQVHSQELLGVLIRQQKTGETWTESADHVVANVTVQNLVRLLGEDAPRQYQQRVKKLP
PSSGAFVIYLGVDAAAIPENCPPHLQFLYDYDGPIGENNSLFVSVSRPGDGRAPEGKATIIASSFTDPKLWDEAEDYDAL
KQEYTEGAIARLSQYFHLTSDTIIHQEAATPRTFAHFTGRSQGIVGGIGQRLSTFGPFGFATRTPIKRLWLVGDSTHPGE
GTAGVSYSALTAVNQLMAMDGTLSME

Specific function: Catalyzes three successive dehydrogenation reactions that lead to the introduction of three double bonds into dehydrosqualene (4,4'-diapophytoene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'- diaponeurosporene (the

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtN subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55537; Mature: 55406

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSPHETDVVVIGAGIGGLTAGALLAKRGYRVKVFDQAWVPGGCASTFKRRGFTFDVGA
CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCEEECCC
TQVAGLEPGGIHHRIFQELGVEIPTASHCDPACAVFLPGETEPISVWRDPDQWQAEREKH
CEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHC
FPGSDGFWQLLANLFRYNWGFQSRDPVIPPRNLWDGWQLLQAVRPDTLLTVPHLFTTVGQ
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHH
LLRLTGLGNQRRLKTFLDLQLKLYSQVNADQTALLYAATALGVSQAPQGLFHLHGSMQVL
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCCCCCEECCCHHHHH
SDRIVEALKKHGGELHMGHSVDQIQVHSQELLGVLIRQQKTGETWTESADHVVANVTVQN
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEHHHHHH
LVRLLGEDAPRQYQQRVKKLPPSSGAFVIYLGVDAAAIPENCPPHLQFLYDYDGPIGENN
HHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC
SLFVSVSRPGDGRAPEGKATIIASSFTDPKLWDEAEDYDALKQEYTEGAIARLSQYFHLT
CEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SDTIIHQEAATPRTFAHFTGRSQGIVGGIGQRLSTFGPFGFATRTPIKRLWLVGDSTHPG
CCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
EGTAGVSYSALTAVNQLMAMDGTLSME
CCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKSPHETDVVVIGAGIGGLTAGALLAKRGYRVKVFDQAWVPGGCASTFKRRGFTFDVGA
CCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCEEECCC
TQVAGLEPGGIHHRIFQELGVEIPTASHCDPACAVFLPGETEPISVWRDPDQWQAEREKH
CEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHC
FPGSDGFWQLLANLFRYNWGFQSRDPVIPPRNLWDGWQLLQAVRPDTLLTVPHLFTTVGQ
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHH
LLRLTGLGNQRRLKTFLDLQLKLYSQVNADQTALLYAATALGVSQAPQGLFHLHGSMQVL
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCCCCCEECCCHHHHH
SDRIVEALKKHGGELHMGHSVDQIQVHSQELLGVLIRQQKTGETWTESADHVVANVTVQN
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEHHHHHH
LVRLLGEDAPRQYQQRVKKLPPSSGAFVIYLGVDAAAIPENCPPHLQFLYDYDGPIGENN
HHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC
SLFVSVSRPGDGRAPEGKATIIASSFTDPKLWDEAEDYDALKQEYTEGAIARLSQYFHLT
CEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SDTIIHQEAATPRTFAHFTGRSQGIVGGIGQRLSTFGPFGFATRTPIKRLWLVGDSTHPG
CCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
EGTAGVSYSALTAVNQLMAMDGTLSME
CCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA