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The map label for this gene is rpsF [H]

Identifier: 158335092

GI number: 158335092

Start: 1928813

End: 1929139

Strand: Reverse

Name: rpsF [H]

Synonym: AM1_1933

Alternate gene names: 158335092

Gene position: 1929139-1928813 (Counterclockwise)

Preceding gene: 158335093

Following gene: 158335090

Centisome position: 29.66

GC content: 47.09

Gene sequence:

>327_bases
ATGACTGCTTACGAGACCATGTATATTCTGCGCCCAGACTTAGGCGAAGAGCAGTTGGATCAGGCGATTAATAAATACCA
AGACCTGCTGAAAGAACAAGGGGTTGAGGACATTGATACTCAACACCGTGGCAAGCGTCGATTGGCATACGAGATCCAGA
ATTTCCGTGAAGGCGTCTATATCCAGATGAACTACAACGGTCAGGGTCATGCGATCGCAAAATTAGAACGTGAAATGCGT
ATCAGTGAACAGGTGATTCGCTACCTGACTCTTAAGCATGAAGGTCCTGCCGCCAACGCAGACGAAGACGAGTCTGATTC
AGAATAA

Upstream 100 bases:

>100_bases
TTCTAGATCCTTGCTTCTTAAAGAGTTGGATCGTGCGTGGCTCCCTGTGAGCACTGCCAGCTAGCTTGAAGAAGCCTCAA
GCCCATAAGGAGAAAATTGA

Downstream 100 bases:

>100_bases
TCGTGGTTAGCAAAACCTGACCCCGAGTATTGTGCTAGAAGACGCTTCCTAACGAAGGCGACGATAGTGCAAAAACAATT
CGTTCTCAACTTGCTTAACA

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVYIQMNYNGQGHAIAKLEREMR
ISEQVIRYLTLKHEGPAANADEDESDSE

Sequences:

>Translated_108_residues
MTAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVYIQMNYNGQGHAIAKLEREMR
ISEQVIRYLTLKHEGPAANADEDESDSE
>Mature_107_residues
TAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVYIQMNYNGQGHAIAKLEREMRI
SEQVIRYLTLKHEGPAANADEDESDSE

Specific function: Binds together with S18 to 16S ribosomal RNA [H]

COG id: COG0360

COG function: function code J; Ribosomal protein S6

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000529
- InterPro:   IPR020815
- InterPro:   IPR020814
- InterPro:   IPR014717 [H]

Pfam domain/function: PF01250 Ribosomal_S6 [H]

EC number: NA

Molecular weight: Translated: 12635; Mature: 12504

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVY
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCEE
IQMNYNGQGHAIAKLEREMRISEQVIRYLTLKHEGPAANADEDESDSE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVY
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCEE
IQMNYNGQGHAIAKLEREMRISEQVIRYLTLKHEGPAANADEDESDSE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA