| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is rcp1 [H]
Identifier: 158334889
GI number: 158334889
Start: 1711876
End: 1712346
Strand: Reverse
Name: rcp1 [H]
Synonym: AM1_1726
Alternate gene names: 158334889
Gene position: 1712346-1711876 (Counterclockwise)
Preceding gene: 158334890
Following gene: 158334888
Centisome position: 26.33
GC content: 48.41
Gene sequence:
>471_bases ATGACCTCAGTCAATGCTGCCCCGATTACGATTTTGATGGCTGACGATGATGAAGATGATCGGATGCTCACGGCCGAAGC TTTAGAGGAGAGCCGACTGAGTAATGACCTTCGCTTTGTCAAAGATGGCGAAGAATTGATGGATTACTTATTTCGCCGAG GTCAATATGCCGACCCGAAAACGTCGCCCCGCCCCGGTCTAATCTTGCTGGATCTCAATATGCCGAAGAAAGACGGACGA GAGGCATTACAGGAGATTAAAGCGAATCCTGAACTCCGCCGTATTCCAATTGTGGTCTTAACCACCTCTAATACGGATAT TGATATTTACCGCAGTTATGACTTGGGGGCCAATACCTACATCACCAAACCTGTGACCTTTGACGCATTAGTTGAGGTGA TGCAAACCCTAGGCCAGTACTGGTTTACCGTTGTGGCATTACCCCCGGAGCAATGTTGTGAGGCATCTTGA
Upstream 100 bases:
>100_bases AGCATCATGGTGGCACCATCACCGCTGAAAGTTCACCGGGCCAAGGCGCAACATTTTTCATCACCTTACCGCTTACCCAA ACCTCCATGGAGCCCCAATC
Downstream 100 bases:
>100_bases TCCACTGCATATCAAACTATTGCTGGTGGAAGATGATGAAGATGACTATTTCTTTTTTGAAGATCTCCTAGACGATTTTC AAAGCATCCAGTTTGATCTG
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTSVNAAPITILMADDDEDDRMLTAEALEESRLSNDLRFVKDGEELMDYLFRRGQYADPKTSPRPGLILLDLNMPKKDGR EALQEIKANPELRRIPIVVLTTSNTDIDIYRSYDLGANTYITKPVTFDALVEVMQTLGQYWFTVVALPPEQCCEAS
Sequences:
>Translated_156_residues MTSVNAAPITILMADDDEDDRMLTAEALEESRLSNDLRFVKDGEELMDYLFRRGQYADPKTSPRPGLILLDLNMPKKDGR EALQEIKANPELRRIPIVVLTTSNTDIDIYRSYDLGANTYITKPVTFDALVEVMQTLGQYWFTVVALPPEQCCEAS >Mature_155_residues TSVNAAPITILMADDDEDDRMLTAEALEESRLSNDLRFVKDGEELMDYLFRRGQYADPKTSPRPGLILLDLNMPKKDGRE ALQEIKANPELRRIPIVVLTTSNTDIDIYRSYDLGANTYITKPVTFDALVEVMQTLGQYWFTVVALPPEQCCEAS
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: 2.7.3.-
Molecular weight: Translated: 17634; Mature: 17503
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVNAAPITILMADDDEDDRMLTAEALEESRLSNDLRFVKDGEELMDYLFRRGQYADPK CCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCHHEEECHHHHHHHHHHCCCCCCCC TSPRPGLILLDLNMPKKDGREALQEIKANPELRRIPIVVLTTSNTDIDIYRSYDLGANTY CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCE ITKPVTFDALVEVMQTLGQYWFTVVALPPEQCCEAS EECCCCHHHHHHHHHHHHHHHEEEEECCHHHHCCCC >Mature Secondary Structure TSVNAAPITILMADDDEDDRMLTAEALEESRLSNDLRFVKDGEELMDYLFRRGQYADPK CCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCHHEEECHHHHHHHHHHCCCCCCCC TSPRPGLILLDLNMPKKDGREALQEIKANPELRRIPIVVLTTSNTDIDIYRSYDLGANTY CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCE ITKPVTFDALVEVMQTLGQYWFTVVALPPEQCCEAS EECCCCHHHHHHHHHHHHHHHEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]