| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334870
Identifier: 158334870
GI number: 158334870
Start: 1690308
End: 1691324
Strand: Direct
Name: 158334870
Synonym: AM1_1707
Alternate gene names: NA
Gene position: 1690308-1691324 (Clockwise)
Preceding gene: 158334868
Following gene: 158334872
Centisome position: 25.99
GC content: 49.46
Gene sequence:
>1017_bases ATGATGGTCCAGTTTAAAATTCAGCCGGATAGCGAGATCCCGGCCTCGACGCAGTTATTTAACCAAGTCTGCTTTGCGAT CGCATCTCGGCAGTTCGCCCCTGGCTACCGACTCCCCAGTACGCGACAGCTGGCCATGCAAACGGGGCTTCATCGCAATA CGATCAGCAAAGTCTATGAACGCCTTGAAAATGCGGGCTTTGTAGAAGCCCAAGTGGGGTCTGGGATTTATGTTCGAGCC TTAGGCCAGGAATCCTTACCGATCACAGAAGAAGAAACGGCCACTCCCGTTCCTGAACTGATTGAGCAAAGTTTAGACGG TTTTCTTCAACGAGGCTACACCCTCAAACAGGTAGAAGAACTATTTCTCAATGCCATCACCGAGCGTCTGCGGGCCAGCA CCCGCGTTATCGTCACCGTCCCTAAACATGACTGGGGAGCAGGTGAAATTATGGTGCAGGAGCTTCAGCAAGCCTTATCG ATCACCATTCAGTTAGTGGCCCTAGAAGAGCTATCTACGGACTTAAAATCCCGAAAAGCAGCGACGGTGCTGACAGTTCG CTATTTTGCCACCCAAGCTGAAGAAATTTTGGCCGACGTGCAGGCCAAACATAAAGACCCCAAAGCCTTTCGCATTATCC CCATCGACATTTATGACTACTCGGAGGAACTTGAGCTGATTAAAGCCTTACCCGAAGGCAGTCGTCTGGGGTTAGTCAGT CTCAGCCCTGGCACCTTAGGGGTGGCTGAAGTCATGATTTATAGCCTTCGGGGGGAAGATATTTACGTCATGAGTGCTGA GTGTAAGGACACCTACAAACTCAATGCCGTTATCCGCCATGCTCAAACCATTATTTGCGATCAAGCCAGTTTCGATCCCT TAAAAGCCGCAGTTATTGCAGCAGAACCAGATCTAATTCGTCTCCCTAAGCTGGTGTGCTGCCGCAATTACATCGATCCA CAGTCCATCGAATTGTTACAGCGAGAATTAGGTATAGAAGATCTATCTAACGCTTAA
Upstream 100 bases:
>100_bases GGCAACTGAACTATTGCAGAAAGAACTGATTTAAGTCTGTCAATCCTTCTCTTCAGCTCATATGATAGAGGGATTGCTGC TTTCACATTGCCCTTGGCCT
Downstream 100 bases:
>100_bases ATCCGTGTTCAGTATCCTTTCTCTACTGCGGCTTATATTTTTCCGGGGCAAGGGATAAACCCTGTCATCAAAGTCTGTTC GCCTAGATACTTGAGCATCA
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR Family Protein; GntR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Repressor
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MMVQFKIQPDSEIPASTQLFNQVCFAIASRQFAPGYRLPSTRQLAMQTGLHRNTISKVYERLENAGFVEAQVGSGIYVRA LGQESLPITEEETATPVPELIEQSLDGFLQRGYTLKQVEELFLNAITERLRASTRVIVTVPKHDWGAGEIMVQELQQALS ITIQLVALEELSTDLKSRKAATVLTVRYFATQAEEILADVQAKHKDPKAFRIIPIDIYDYSEELELIKALPEGSRLGLVS LSPGTLGVAEVMIYSLRGEDIYVMSAECKDTYKLNAVIRHAQTIICDQASFDPLKAAVIAAEPDLIRLPKLVCCRNYIDP QSIELLQRELGIEDLSNA
Sequences:
>Translated_338_residues MMVQFKIQPDSEIPASTQLFNQVCFAIASRQFAPGYRLPSTRQLAMQTGLHRNTISKVYERLENAGFVEAQVGSGIYVRA LGQESLPITEEETATPVPELIEQSLDGFLQRGYTLKQVEELFLNAITERLRASTRVIVTVPKHDWGAGEIMVQELQQALS ITIQLVALEELSTDLKSRKAATVLTVRYFATQAEEILADVQAKHKDPKAFRIIPIDIYDYSEELELIKALPEGSRLGLVS LSPGTLGVAEVMIYSLRGEDIYVMSAECKDTYKLNAVIRHAQTIICDQASFDPLKAAVIAAEPDLIRLPKLVCCRNYIDP QSIELLQRELGIEDLSNA >Mature_338_residues MMVQFKIQPDSEIPASTQLFNQVCFAIASRQFAPGYRLPSTRQLAMQTGLHRNTISKVYERLENAGFVEAQVGSGIYVRA LGQESLPITEEETATPVPELIEQSLDGFLQRGYTLKQVEELFLNAITERLRASTRVIVTVPKHDWGAGEIMVQELQQALS ITIQLVALEELSTDLKSRKAATVLTVRYFATQAEEILADVQAKHKDPKAFRIIPIDIYDYSEELELIKALPEGSRLGLVS LSPGTLGVAEVMIYSLRGEDIYVMSAECKDTYKLNAVIRHAQTIICDQASFDPLKAAVIAAEPDLIRLPKLVCCRNYIDP QSIELLQRELGIEDLSNA
Specific function: Unknown
COG id: COG1725
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37655; Mature: 37655
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVQFKIQPDSEIPASTQLFNQVCFAIASRQFAPGYRLPSTRQLAMQTGLHRNTISKVYE CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH RLENAGFVEAQVGSGIYVRALGQESLPITEEETATPVPELIEQSLDGFLQRGYTLKQVEE HHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LFLNAITERLRASTRVIVTVPKHDWGAGEIMVQELQQALSITIQLVALEELSTDLKSRKA HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCH ATVLTVRYFATQAEEILADVQAKHKDPKAFRIIPIDIYDYSEELELIKALPEGSRLGLVS HHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCEEEEE LSPGTLGVAEVMIYSLRGEDIYVMSAECKDTYKLNAVIRHAQTIICDQASFDPLKAAVIA ECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCHHHEEEEE AEPDLIRLPKLVCCRNYIDPQSIELLQRELGIEDLSNA CCCCHHHCCHHHHHHCCCCHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MMVQFKIQPDSEIPASTQLFNQVCFAIASRQFAPGYRLPSTRQLAMQTGLHRNTISKVYE CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH RLENAGFVEAQVGSGIYVRALGQESLPITEEETATPVPELIEQSLDGFLQRGYTLKQVEE HHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LFLNAITERLRASTRVIVTVPKHDWGAGEIMVQELQQALSITIQLVALEELSTDLKSRKA HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCH ATVLTVRYFATQAEEILADVQAKHKDPKAFRIIPIDIYDYSEELELIKALPEGSRLGLVS HHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCEEEEE LSPGTLGVAEVMIYSLRGEDIYVMSAECKDTYKLNAVIRHAQTIICDQASFDPLKAAVIA ECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCHHHEEEEE AEPDLIRLPKLVCCRNYIDPQSIELLQRELGIEDLSNA CCCCHHHCCHHHHHHCCCCHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA