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The map label for this gene is ynbB [H]

Identifier: 158334695

GI number: 158334695

Start: 1511776

End: 1513008

Strand: Direct

Name: ynbB [H]

Synonym: AM1_1528

Alternate gene names: 158334695

Gene position: 1511776-1513008 (Clockwise)

Preceding gene: 158334681

Following gene: 158334703

Centisome position: 23.24

GC content: 50.53

Gene sequence:

>1233_bases
ATGAAACCCCTTACACAGCTAGAGGCAGCCGAACAGGCAATGTCTCTCATCTTTTCTAAGATTGACACTCAAGTCAAGAA
AAACTTAACACAAATATTAAAATCTTTTCATAATTACCGCTTAGGTCCCCATCATTTTGCTAGTGTATCGGGTTACGGTC
ATGACGATTTAGGGCGGCAAGTCCTAGATCAGGTGTTTGCCGACGTTATGGGCGCAGAAGCGGCTCTGGTGCGGGTCCAA
TTTGTATCCGGCACCCATGCGATCGCAGCGGCTCTATTTGGCGTATTGCGTCCCGGAGACCAAATGCTATCCGTAGCCGG
GGCACCCTACGACACCTTAGAAGAAGTGATTGGCATTCGAGGCAAAGGCCAAGGATCCCTTAAAGATTTTGGGGTAGCGT
ATCGGCAACTGGAGTTAACCCCTGCCGGAACCATCGATTGGCAGGCTCTAGAAACTAGCATTCAACCCCAAACCCGTCTC
GTCTTGATTCAGCGATCTTGTGGCTATAGCTGGCGGCCCAGCCTGAGTATTGAAGAAATTGGCAAAATTGTGGACCGGAT
AAAAGCCCAAAACCCCAATACCATTTGCTTTGTCGATAATTGCTACGGGGAATTTATTGAAGACCGCGAACCTCCATCTG
TTGGGGCCGATTTGATTGCCGGTTCCCTAATCAAAAACCCTGGCGGTACCATTGTTACCGCCGGAGGGTACATTGCTGGA
CGTCGTGATCTAGTGGAAGCCGCAGCCTGTCGACTCACCTCACCGGGAATTGGTTCAGCAGGAGGAGCGACTTTGGATCA
AACCCGGTTGATGTTTCAAGGCTTATTTTTAGCCCCCCAAATGGTGGGGGAAGCCATGAAGGGCAATCATCTAGTAGCTC
ATGTGTTTCAGAAGCTAGGCTATCCCGTCAATCCCTTGCCTGAAGCACCGCGTCGGGATGTGATTCAGGCGGTCAAGCTC
GGATCTGAAGAAAAGTTGGTGGCCTTTTGTCGGGCCTTTCAACAATATTCACCTGTGGGGTCTTATCTGGATCCGATGCC
TGCCCCGATGCCGGGCTATGAAAGTAATTTAGTCATGGCAGGAGGGACTTTTATAGATGGCAGTACCTCAGAACTCTCTG
CTGATGGGCCGTTGCGAGAGCCTTATATTGTCTTCTGTCAGGGAGGAACCCACTGGACTCATGTTGCGATCGCACTAGAA
GCTGCCATTGAAGCCGTTGGCCCAGCCTCTTAA

Upstream 100 bases:

>100_bases
GATTCTTATACTTGCCTAATCTCCGCCTAAGCTCTGTACGTCCACAACGATAAAAAATCAAACCTTTAGTGGCTGTACGT
TGTAAAGAAAAAGTTGCTCT

Downstream 100 bases:

>100_bases
TCATCAAAAAGGGCCTGTTAATGTAACAGGCCCCGGGTCGTTTCAAATTTGCGGTGATTTAAAAGACTTGCTCAACCTCA
GCAATTTCAGGAATGGTGTC

Product: aluminium resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKPLTQLEAAEQAMSLIFSKIDTQVKKNLTQILKSFHNYRLGPHHFASVSGYGHDDLGRQVLDQVFADVMGAEAALVRVQ
FVSGTHAIAAALFGVLRPGDQMLSVAGAPYDTLEEVIGIRGKGQGSLKDFGVAYRQLELTPAGTIDWQALETSIQPQTRL
VLIQRSCGYSWRPSLSIEEIGKIVDRIKAQNPNTICFVDNCYGEFIEDREPPSVGADLIAGSLIKNPGGTIVTAGGYIAG
RRDLVEAAACRLTSPGIGSAGGATLDQTRLMFQGLFLAPQMVGEAMKGNHLVAHVFQKLGYPVNPLPEAPRRDVIQAVKL
GSEEKLVAFCRAFQQYSPVGSYLDPMPAPMPGYESNLVMAGGTFIDGSTSELSADGPLREPYIVFCQGGTHWTHVAIALE
AAIEAVGPAS

Sequences:

>Translated_410_residues
MKPLTQLEAAEQAMSLIFSKIDTQVKKNLTQILKSFHNYRLGPHHFASVSGYGHDDLGRQVLDQVFADVMGAEAALVRVQ
FVSGTHAIAAALFGVLRPGDQMLSVAGAPYDTLEEVIGIRGKGQGSLKDFGVAYRQLELTPAGTIDWQALETSIQPQTRL
VLIQRSCGYSWRPSLSIEEIGKIVDRIKAQNPNTICFVDNCYGEFIEDREPPSVGADLIAGSLIKNPGGTIVTAGGYIAG
RRDLVEAAACRLTSPGIGSAGGATLDQTRLMFQGLFLAPQMVGEAMKGNHLVAHVFQKLGYPVNPLPEAPRRDVIQAVKL
GSEEKLVAFCRAFQQYSPVGSYLDPMPAPMPGYESNLVMAGGTFIDGSTSELSADGPLREPYIVFCQGGTHWTHVAIALE
AAIEAVGPAS
>Mature_410_residues
MKPLTQLEAAEQAMSLIFSKIDTQVKKNLTQILKSFHNYRLGPHHFASVSGYGHDDLGRQVLDQVFADVMGAEAALVRVQ
FVSGTHAIAAALFGVLRPGDQMLSVAGAPYDTLEEVIGIRGKGQGSLKDFGVAYRQLELTPAGTIDWQALETSIQPQTRL
VLIQRSCGYSWRPSLSIEEIGKIVDRIKAQNPNTICFVDNCYGEFIEDREPPSVGADLIAGSLIKNPGGTIVTAGGYIAG
RRDLVEAAACRLTSPGIGSAGGATLDQTRLMFQGLFLAPQMVGEAMKGNHLVAHVFQKLGYPVNPLPEAPRRDVIQAVKL
GSEEKLVAFCRAFQQYSPVGSYLDPMPAPMPGYESNLVMAGGTFIDGSTSELSADGPLREPYIVFCQGGTHWTHVAIALE
AAIEAVGPAS

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 43957; Mature: 43957

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLTQLEAAEQAMSLIFSKIDTQVKKNLTQILKSFHNYRLGPHHFASVSGYGHDDLGRQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHH
VLDQVFADVMGAEAALVRVQFVSGTHAIAAALFGVLRPGDQMLSVAGAPYDTLEEVIGIR
HHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCC
GKGQGSLKDFGVAYRQLELTPAGTIDWQALETSIQPQTRLVLIQRSCGYSWRPSLSIEEI
CCCCCCHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHH
GKIVDRIKAQNPNTICFVDNCYGEFIEDREPPSVGADLIAGSLIKNPGGTIVTAGGYIAG
HHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
RRDLVEAAACRLTSPGIGSAGGATLDQTRLMFQGLFLAPQMVGEAMKGNHLVAHVFQKLG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
YPVNPLPEAPRRDVIQAVKLGSEEKLVAFCRAFQQYSPVGSYLDPMPAPMPGYESNLVMA
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEE
GGTFIDGSTSELSADGPLREPYIVFCQGGTHWTHVAIALEAAIEAVGPAS
CCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPLTQLEAAEQAMSLIFSKIDTQVKKNLTQILKSFHNYRLGPHHFASVSGYGHDDLGRQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHH
VLDQVFADVMGAEAALVRVQFVSGTHAIAAALFGVLRPGDQMLSVAGAPYDTLEEVIGIR
HHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCC
GKGQGSLKDFGVAYRQLELTPAGTIDWQALETSIQPQTRLVLIQRSCGYSWRPSLSIEEI
CCCCCCHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHH
GKIVDRIKAQNPNTICFVDNCYGEFIEDREPPSVGADLIAGSLIKNPGGTIVTAGGYIAG
HHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
RRDLVEAAACRLTSPGIGSAGGATLDQTRLMFQGLFLAPQMVGEAMKGNHLVAHVFQKLG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
YPVNPLPEAPRRDVIQAVKLGSEEKLVAFCRAFQQYSPVGSYLDPMPAPMPGYESNLVMA
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEE
GGTFIDGSTSELSADGPLREPYIVFCQGGTHWTHVAIALEAAIEAVGPAS
CCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]