| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334670
Identifier: 158334670
GI number: 158334670
Start: 1491012
End: 1491689
Strand: Direct
Name: 158334670
Synonym: AM1_1502
Alternate gene names: NA
Gene position: 1491012-1491689 (Clockwise)
Preceding gene: 158334669
Following gene: 158334671
Centisome position: 22.93
GC content: 45.72
Gene sequence:
>678_bases ATGACATCAACTACTTTTCAAGTATCGGACTCAACGAATGTCTCGATTGCACAACCGGATTTATATGTATCACTTTTAAA TAAAAGTTTCCTATTTTCCTCAGCTGGAACCCAGGAAGATTATGCCCATCAATTATTAGAGCTTAATGGCCTTGCTTGTC AGCTCAATCAGCTGCTCCAGCAAGCTCCCGAGCATCATTGTGCTCAAAGTGCCGTGGGAGTCGTTATTCCCAGTGGCTTA ACGGCCAAAGAAGCCTATCAATTGGGTAAAGAACTCGGCCAACAGGAATATCAACATTTTGTCGCCTTAGCCTCTACACC CCAGCGATACCTGTTACCCGAGCAATTACTCGTGCTGATTGACTGGTGGTCCCAATCTTACTTATCCCATTATGGTCAAT TACTGATTGACGCAACCCGCTCATCCGATACCTATATTTATTTAGAGGTGTTGAGCACCTCCCATATCAGCCTCAAGCAG GACGAGCATCATCCCGATTGCGCCTTCTATGGGGGGCTAATTGCAGGCTTCTTTAGTGGCTTAGTGGACCGTGATTTTGA GGTCATTGAGCCAGATTGGTGGCAAGCAAAAGGCAAACGCTGTCATTTTCTAATGGCCCCTCAATCAGAGCTGGATGCCC AATTCTTTTGGCAAACCGTTGATACATTATCAGCCTAG
Upstream 100 bases:
>100_bases TTTTCTCTTTACTCTCTCCAAATATATTGAGACTAGGTCACACCAAAGTGGCTTTTCGTTTCACCACGCACAGAAATCTG CTGGCCTTATAGGGGGAATT
Downstream 100 bases:
>100_bases GGTTGCGGAAAGGAGGATGACCATGATGACAACCTATTCTAAACCCGCTACGCCAGAGCGCATCAGCAATGAAGTCACCA CCACAACCTGTTATTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTSTTFQVSDSTNVSIAQPDLYVSLLNKSFLFSSAGTQEDYAHQLLELNGLACQLNQLLQQAPEHHCAQSAVGVVIPSGL TAKEAYQLGKELGQQEYQHFVALASTPQRYLLPEQLLVLIDWWSQSYLSHYGQLLIDATRSSDTYIYLEVLSTSHISLKQ DEHHPDCAFYGGLIAGFFSGLVDRDFEVIEPDWWQAKGKRCHFLMAPQSELDAQFFWQTVDTLSA
Sequences:
>Translated_225_residues MTSTTFQVSDSTNVSIAQPDLYVSLLNKSFLFSSAGTQEDYAHQLLELNGLACQLNQLLQQAPEHHCAQSAVGVVIPSGL TAKEAYQLGKELGQQEYQHFVALASTPQRYLLPEQLLVLIDWWSQSYLSHYGQLLIDATRSSDTYIYLEVLSTSHISLKQ DEHHPDCAFYGGLIAGFFSGLVDRDFEVIEPDWWQAKGKRCHFLMAPQSELDAQFFWQTVDTLSA >Mature_224_residues TSTTFQVSDSTNVSIAQPDLYVSLLNKSFLFSSAGTQEDYAHQLLELNGLACQLNQLLQQAPEHHCAQSAVGVVIPSGLT AKEAYQLGKELGQQEYQHFVALASTPQRYLLPEQLLVLIDWWSQSYLSHYGQLLIDATRSSDTYIYLEVLSTSHISLKQD EHHPDCAFYGGLIAGFFSGLVDRDFEVIEPDWWQAKGKRCHFLMAPQSELDAQFFWQTVDTLSA
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25297; Mature: 25165
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTTFQVSDSTNVSIAQPDLYVSLLNKSFLFSSAGTQEDYAHQLLELNGLACQLNQLLQ CCCCEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH QAPEHHCAQSAVGVVIPSGLTAKEAYQLGKELGQQEYQHFVALASTPQRYLLPEQLLVLI HCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH DWWSQSYLSHYGQLLIDATRSSDTYIYLEVLSTSHISLKQDEHHPDCAFYGGLIAGFFSG HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHH LVDRDFEVIEPDWWQAKGKRCHFLMAPQSELDAQFFWQTVDTLSA HHCCCCEEECCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSTTFQVSDSTNVSIAQPDLYVSLLNKSFLFSSAGTQEDYAHQLLELNGLACQLNQLLQ CCCEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH QAPEHHCAQSAVGVVIPSGLTAKEAYQLGKELGQQEYQHFVALASTPQRYLLPEQLLVLI HCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH DWWSQSYLSHYGQLLIDATRSSDTYIYLEVLSTSHISLKQDEHHPDCAFYGGLIAGFFSG HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHH LVDRDFEVIEPDWWQAKGKRCHFLMAPQSELDAQFFWQTVDTLSA HHCCCCEEECCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA