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The map label for this gene is ykoG [H]

Identifier: 158334650

GI number: 158334650

Start: 1469950

End: 1470624

Strand: Reverse

Name: ykoG [H]

Synonym: AM1_1480

Alternate gene names: 158334650

Gene position: 1470624-1469950 (Counterclockwise)

Preceding gene: 158334651

Following gene: 158334649

Centisome position: 22.61

GC content: 51.41

Gene sequence:

>675_bases
ATGACAGCACATATTCTCCTGGTTGAAGACGAAACCAAACTGGCTCAATTTGTTGAAATGGAACTGACCCATGAGGGGTA
TCAGGTGACCGTGGCCAATGATGGCATCGGGGGACTCACCGCTGCTCGCGAGTCTCAACCGGATTTAATTCTCCTGGACT
GGATGCTGCCAGGATTCTCTGGCGTTGAAGTCTGTCGACGTCTGCGGGCAACCGGGGATAAAGTTCCCGTTATTTTATTG
ACCGCCAAAGATGAAATTAGCGATCGGGTCGAAGGGCTAGATGCCGGGGCGGATGACTATATGGTGAAGCCCTTTAGCAT
CGAAGAGCTGTTAGCTAGGGTGCGAGCCCACTTGCGGCGCACCCAGGAAGAAGATCCCGATGTCCTAGAATTCTCCAACT
TGACCCTTAACCAGCGCACCCGTGAGATCTTCCGCGGTGAACGCTCGATTGAGCTAACGGCCAAGGAGTTTGATTTGCTG
GTGTATTTGATGATGCATCCTCGCCAGGTATTGACCCGCGATCGCATCCTGGAACAAGTCTGGGGCTACGACTTTATGGG
AGACTCCAATATCATCGAAGTTTACATTCGCTACCTTCGTCTCAAGCTAGAAGAGAACCAAGAAAAGCGGTTAATTCAGA
CGGTCAGGGGCGTGGGTTATGTCATGAGAGAGTAA

Upstream 100 bases:

>100_bases
CCTTTACCGAAGGCATGGGAGGACAAGTCAGTGTCCTGTCTGCCGAGGGTGAAGGCAGTACATTCACCGTGACGTTACCC
ATATCTCCTGAAGCAAAAAT

Downstream 100 bases:

>100_bases
GCGGCTATTGCTTTGGTAAACGTAAAGTCCAATGAAGGGATGCGCCCTTAACTTGATCCCATGAATGCTCACCCCTTAGG
ATGAGGCTCAGTTATCGATC

Product: two-component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTAHILLVEDETKLAQFVEMELTHEGYQVTVANDGIGGLTAARESQPDLILLDWMLPGFSGVEVCRRLRATGDKVPVILL
TAKDEISDRVEGLDAGADDYMVKPFSIEELLARVRAHLRRTQEEDPDVLEFSNLTLNQRTREIFRGERSIELTAKEFDLL
VYLMMHPRQVLTRDRILEQVWGYDFMGDSNIIEVYIRYLRLKLEENQEKRLIQTVRGVGYVMRE

Sequences:

>Translated_224_residues
MTAHILLVEDETKLAQFVEMELTHEGYQVTVANDGIGGLTAARESQPDLILLDWMLPGFSGVEVCRRLRATGDKVPVILL
TAKDEISDRVEGLDAGADDYMVKPFSIEELLARVRAHLRRTQEEDPDVLEFSNLTLNQRTREIFRGERSIELTAKEFDLL
VYLMMHPRQVLTRDRILEQVWGYDFMGDSNIIEVYIRYLRLKLEENQEKRLIQTVRGVGYVMRE
>Mature_223_residues
TAHILLVEDETKLAQFVEMELTHEGYQVTVANDGIGGLTAARESQPDLILLDWMLPGFSGVEVCRRLRATGDKVPVILLT
AKDEISDRVEGLDAGADDYMVKPFSIEELLARVRAHLRRTQEEDPDVLEFSNLTLNQRTREIFRGERSIELTAKEFDLLV
YLMMHPRQVLTRDRILEQVWGYDFMGDSNIIEVYIRYLRLKLEENQEKRLIQTVRGVGYVMRE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=40.8071748878924, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=42.4657534246575, Blast_Score=171, Evalue=2e-44,
Organism=Escherichia coli, GI87082012, Length=216, Percent_Identity=43.0555555555556, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=43.3628318584071, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=42.0814479638009, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=39.3665158371041, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=36.3636363636364, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=37.8378378378378, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=38.7665198237885, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=32.1100917431193, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.2070484581498, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=33.9130434782609, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=31.6017316017316, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=31.304347826087, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=34.8214285714286, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790437, Length=127, Percent_Identity=31.496062992126, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=140, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788521, Length=220, Percent_Identity=30.4545454545455, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25900; Mature: 25769

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHILLVEDETKLAQFVEMELTHEGYQVTVANDGIGGLTAARESQPDLILLDWMLPGFS
CCEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
GVEVCRRLRATGDKVPVILLTAKDEISDRVEGLDAGADDYMVKPFSIEELLARVRAHLRR
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHH
TQEEDPDVLEFSNLTLNQRTREIFRGERSIELTAKEFDLLVYLMMHPRQVLTRDRILEQV
CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGYDFMGDSNIIEVYIRYLRLKLEENQEKRLIQTVRGVGYVMRE
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAHILLVEDETKLAQFVEMELTHEGYQVTVANDGIGGLTAARESQPDLILLDWMLPGFS
CEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
GVEVCRRLRATGDKVPVILLTAKDEISDRVEGLDAGADDYMVKPFSIEELLARVRAHLRR
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHH
TQEEDPDVLEFSNLTLNQRTREIFRGERSIELTAKEFDLLVYLMMHPRQVLTRDRILEQV
CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGYDFMGDSNIIEVYIRYLRLKLEENQEKRLIQTVRGVGYVMRE
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]