| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is tar [C]
Identifier: 158334551
GI number: 158334551
Start: 1355861
End: 1357858
Strand: Direct
Name: tar [C]
Synonym: AM1_1378
Alternate gene names: 158334551
Gene position: 1355861-1357858 (Clockwise)
Preceding gene: 158334550
Following gene: 158334552
Centisome position: 20.85
GC content: 48.15
Gene sequence:
>1998_bases ATGCAGGACTTAGACGCTGCAGAGCCTAAAGCTGACCCGTGGGATACGCAAACAGAAACTACCGTTGGTGAGGGTGTGGA AGAGATCACCAGTGGGGTAACGGCTCAGAGTTCACAGTCCGAACATTCAACTTCAACAACATCAACCCAATCTTCTAGCT GGGCTGAATCCCCCGGCCCTGAGAAGAATAAAGAGGTTCCGTTTAAAGCTAAAGCCATGTCTCTAGCCTTGGCTGTCAGT ATGTTGCCAGTTCTTGCAGTCGGAACCGTCACCTACTTTAGTGGGCAATTAGTTCAGCAACAAATGACTCAGGAGCGGCA AGCTGGCAATCCAGATCTCCAGGCAACCGAACGCTCTATTCAGCAGCAACTCCCTTCCCTATTAATAGGAACGGGCATTA CAGCTATTCTTGCCGGTGCGATCGCAGCTTGGTTAGCCCATCGAGCCACGACTCCCATACTGAAAGCAATTCAAGTCTCT GATGAAATGCTCCAGCAAATTCGGCCGGGCATGGTGAAACCAGAGACAGCTGAGACAGATATTTTAAGCCAGCTAGAACA TAATATTCGCAGTATCGAAGGTTATATCCCGGCCTTACTGGCCCAGCAAGATTCAGAAATTGAGCAGTTACAGATGCTCA AGTACATCACCAACAAAATTCGCGCCTCCCTCAATGAAGATGATGTTCTCAACACCACCGTTGAAGAAGCCCGCAAAATC ATCAAGGCCGATCGGGTTATCGTCTATGGATTTGATGAAGATTGGTATGGCACGGTGATTGCTGAATCCGCTATCCCAGG CATTGCTAAAGCATTATGGGCAGAAATTAAAGATCCCTGTTTTGCCGAAAACTATGTGGAGAAGTATCGCGCAGGCCGGA TTCAAGCCATCAATAACGTCCACGAGGCAGGTTTAACCAAATGCCATCTGGCTCAGTTAGAGCCCTTTCAAGTCAAAGCC AACCTAGTGGTGCCAATTCTGCGAGAGGAGAAGTTATTTGGCTTATTGATTGCCCATCAATGTACCCAACCCCGAGTATG GCAAGAGTCAGAAATTAACCTCTTTGCCCAAGTCGCCTCCCAAGTTGGATTTGCCCTTGACCATGCCCGACTTCTCGTTC AAGTCGATCAAGCCAATAACAACGCGATGGCCCACACTCAGCAGGCAGCTCAAGACTATGAAATGCTACAGCAGAGAATT TCACAGCTTTCCTTAGAAAGCAATAGCGTGGTGGAATTATTTGGCACAGATGCCAACATGGCGATCACCAATACCCAAGA TCAGATGCATGAGATTGCTGAAGCAGCTGATCAAATTCACGTCATCCTCAATGAGATTACCCAAACCCAGGAACAAGTGC AGATTGCCACACAAGAAAGTCAAACTGGGATGACCCATACCGTGGACCATTTACAGTCTCTATCCAAATTGGTAGAAACC GTTGACCAGTCGGTCCATCCCTTACAGCAACCCACCCAACAACTCGGTGAGCTGATCGATTTAATGGGGCATGTGGTGTC TCAAGTCCAGCTGCAGGCAATGAATGCAGCCCTAGAAGCGGCTCGATCGGGTGCTGCAGGCCAATCTTTTGCTGAGATCG CCGAAAAGGTTCATGGCTTGTCTCGACAACTAGACGCAACCCTGACGGATGTCAAACCCTTAGTCAGCCATATCCAAACC ACCACTCAATCTGTGGGTCAGGAGATGGCTAGTGGGAAAAACGCGATTGCGGTAGACACCCAAACCTTAGGCAGCACCCA AATCAAGTTGGCTGAATTAAATAGCTTAAATCAACGGGTCTTGGATCTCGTGCAGCAAATTGCTGAAGTCACTACAAATC AAGTGGAATTATCGGTGTTAGGTCACAAAACATTGGATCATCTTGCAAACACTACCCTCAGTGCAACAACACAATCTTCC CAAATTGCAGAAGCGGTTCATCAGCTCATGGCTACGGTCAATAACGACCTCCACTCGGAAGATTCCTTTTCGGCCTAG
Upstream 100 bases:
>100_bases GATGACACATTCTTCTACTCCTTTAGACATCGATACGGCTGGCCAGGATGATCTTTCTGGCAATCAAGATTCATCACCAT CAGCTGTCTCTATCCCTCCC
Downstream 100 bases:
>100_bases TTCATGACTCTGATAACGTTCCATCCTTTGCTTTGTCTTGTCTTCAGTCCCATCTTATTTATGTTGGGACTCTCCCCTCT AATCTGCCAATCAGTTCATG
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MQDLDAAEPKADPWDTQTETTVGEGVEEITSGVTAQSSQSEHSTSTTSTQSSSWAESPGPEKNKEVPFKAKAMSLALAVS MLPVLAVGTVTYFSGQLVQQQMTQERQAGNPDLQATERSIQQQLPSLLIGTGITAILAGAIAAWLAHRATTPILKAIQVS DEMLQQIRPGMVKPETAETDILSQLEHNIRSIEGYIPALLAQQDSEIEQLQMLKYITNKIRASLNEDDVLNTTVEEARKI IKADRVIVYGFDEDWYGTVIAESAIPGIAKALWAEIKDPCFAENYVEKYRAGRIQAINNVHEAGLTKCHLAQLEPFQVKA NLVVPILREEKLFGLLIAHQCTQPRVWQESEINLFAQVASQVGFALDHARLLVQVDQANNNAMAHTQQAAQDYEMLQQRI SQLSLESNSVVELFGTDANMAITNTQDQMHEIAEAADQIHVILNEITQTQEQVQIATQESQTGMTHTVDHLQSLSKLVET VDQSVHPLQQPTQQLGELIDLMGHVVSQVQLQAMNAALEAARSGAAGQSFAEIAEKVHGLSRQLDATLTDVKPLVSHIQT TTQSVGQEMASGKNAIAVDTQTLGSTQIKLAELNSLNQRVLDLVQQIAEVTTNQVELSVLGHKTLDHLANTTLSATTQSS QIAEAVHQLMATVNNDLHSEDSFSA
Sequences:
>Translated_665_residues MQDLDAAEPKADPWDTQTETTVGEGVEEITSGVTAQSSQSEHSTSTTSTQSSSWAESPGPEKNKEVPFKAKAMSLALAVS MLPVLAVGTVTYFSGQLVQQQMTQERQAGNPDLQATERSIQQQLPSLLIGTGITAILAGAIAAWLAHRATTPILKAIQVS DEMLQQIRPGMVKPETAETDILSQLEHNIRSIEGYIPALLAQQDSEIEQLQMLKYITNKIRASLNEDDVLNTTVEEARKI IKADRVIVYGFDEDWYGTVIAESAIPGIAKALWAEIKDPCFAENYVEKYRAGRIQAINNVHEAGLTKCHLAQLEPFQVKA NLVVPILREEKLFGLLIAHQCTQPRVWQESEINLFAQVASQVGFALDHARLLVQVDQANNNAMAHTQQAAQDYEMLQQRI SQLSLESNSVVELFGTDANMAITNTQDQMHEIAEAADQIHVILNEITQTQEQVQIATQESQTGMTHTVDHLQSLSKLVET VDQSVHPLQQPTQQLGELIDLMGHVVSQVQLQAMNAALEAARSGAAGQSFAEIAEKVHGLSRQLDATLTDVKPLVSHIQT TTQSVGQEMASGKNAIAVDTQTLGSTQIKLAELNSLNQRVLDLVQQIAEVTTNQVELSVLGHKTLDHLANTTLSATTQSS QIAEAVHQLMATVNNDLHSEDSFSA >Mature_665_residues MQDLDAAEPKADPWDTQTETTVGEGVEEITSGVTAQSSQSEHSTSTTSTQSSSWAESPGPEKNKEVPFKAKAMSLALAVS MLPVLAVGTVTYFSGQLVQQQMTQERQAGNPDLQATERSIQQQLPSLLIGTGITAILAGAIAAWLAHRATTPILKAIQVS DEMLQQIRPGMVKPETAETDILSQLEHNIRSIEGYIPALLAQQDSEIEQLQMLKYITNKIRASLNEDDVLNTTVEEARKI IKADRVIVYGFDEDWYGTVIAESAIPGIAKALWAEIKDPCFAENYVEKYRAGRIQAINNVHEAGLTKCHLAQLEPFQVKA NLVVPILREEKLFGLLIAHQCTQPRVWQESEINLFAQVASQVGFALDHARLLVQVDQANNNAMAHTQQAAQDYEMLQQRI SQLSLESNSVVELFGTDANMAITNTQDQMHEIAEAADQIHVILNEITQTQEQVQIATQESQTGMTHTVDHLQSLSKLVET VDQSVHPLQQPTQQLGELIDLMGHVVSQVQLQAMNAALEAARSGAAGQSFAEIAEKVHGLSRQLDATLTDVKPLVSHIQT TTQSVGQEMASGKNAIAVDTQTLGSTQIKLAELNSLNQRVLDLVQQIAEVTTNQVELSVLGHKTLDHLANTTLSATTQSS QIAEAVHQLMATVNNDLHSEDSFSA
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: COG2203
COG function: function code T; FOG: GAF domain
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 72548; Mature: 72548
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50046 PHYTOCHROME_2 ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLDAAEPKADPWDTQTETTVGEGVEEITSGVTAQSSQSEHSTSTTSTQSSSWAESPGP CCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKNKEVPFKAKAMSLALAVSMLPVLAVGTVTYFSGQLVQQQMTQERQAGNPDLQATERSI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QQQLPSLLIGTGITAILAGAIAAWLAHRATTPILKAIQVSDEMLQQIRPGMVKPETAETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ILSQLEHNIRSIEGYIPALLAQQDSEIEQLQMLKYITNKIRASLNEDDVLNTTVEEARKI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IKADRVIVYGFDEDWYGTVIAESAIPGIAKALWAEIKDPCFAENYVEKYRAGRIQAINNV HHHCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH HEAGLTKCHLAQLEPFQVKANLVVPILREEKLFGLLIAHQCTQPRVWQESEINLFAQVAS HHHCCCHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QVGFALDHARLLVQVDQANNNAMAHTQQAAQDYEMLQQRISQLSLESNSVVELFGTDANM HHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE AITNTQDQMHEIAEAADQIHVILNEITQTQEQVQIATQESQTGMTHTVDHLQSLSKLVET EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VDQSVHPLQQPTQQLGELIDLMGHVVSQVQLQAMNAALEAARSGAAGQSFAEIAEKVHGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SRQLDATLTDVKPLVSHIQTTTQSVGQEMASGKNAIAVDTQTLGSTQIKLAELNSLNQRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH LDLVQQIAEVTTNQVELSVLGHKTLDHLANTTLSATTQSSQIAEAVHQLMATVNNDLHSE HHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DSFSA CCCCC >Mature Secondary Structure MQDLDAAEPKADPWDTQTETTVGEGVEEITSGVTAQSSQSEHSTSTTSTQSSSWAESPGP CCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKNKEVPFKAKAMSLALAVSMLPVLAVGTVTYFSGQLVQQQMTQERQAGNPDLQATERSI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QQQLPSLLIGTGITAILAGAIAAWLAHRATTPILKAIQVSDEMLQQIRPGMVKPETAETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ILSQLEHNIRSIEGYIPALLAQQDSEIEQLQMLKYITNKIRASLNEDDVLNTTVEEARKI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IKADRVIVYGFDEDWYGTVIAESAIPGIAKALWAEIKDPCFAENYVEKYRAGRIQAINNV HHHCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH HEAGLTKCHLAQLEPFQVKANLVVPILREEKLFGLLIAHQCTQPRVWQESEINLFAQVAS HHHCCCHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QVGFALDHARLLVQVDQANNNAMAHTQQAAQDYEMLQQRISQLSLESNSVVELFGTDANM HHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCE AITNTQDQMHEIAEAADQIHVILNEITQTQEQVQIATQESQTGMTHTVDHLQSLSKLVET EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VDQSVHPLQQPTQQLGELIDLMGHVVSQVQLQAMNAALEAARSGAAGQSFAEIAEKVHGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SRQLDATLTDVKPLVSHIQTTTQSVGQEMASGKNAIAVDTQTLGSTQIKLAELNSLNQRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH LDLVQQIAEVTTNQVELSVLGHKTLDHLANTTLSATTQSSQIAEAVHQLMATVNNDLHSE HHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCC DSFSA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]