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The map label for this gene is yhbQ [C]

Identifier: 158334445

GI number: 158334445

Start: 1253966

End: 1254223

Strand: Reverse

Name: yhbQ [C]

Synonym: AM1_1266

Alternate gene names: 158334445

Gene position: 1254223-1253966 (Counterclockwise)

Preceding gene: 158334446

Following gene: 158334444

Centisome position: 19.28

GC content: 49.22

Gene sequence:

>258_bases
ATGTCTGAATGGCATCTCTATATCCTTCGTACCCGGAATGGGGCCTTGTATACAGGTGTGACGACAGACGTGGCGCGTCG
ACTGGAGGAGCATACCTACAGCAAAAAAGGGGCCAAGTTTTTGCGCTCAAAAGGTCCATTGCAGTTGGTTTATCAACAAC
CCGTCGGCAGTCGCTCCGAAGCTCAGCGATTGGAATACCAAATTAAACAACTGTCGAAGCAACAAAAAGAGACCTTTATC
GCCACTCACGGCTCTTGA

Upstream 100 bases:

>100_bases
GACTGATTGGCGTTGTACTGTTGCGATGGTCAATGACCTGCCAGAGGCCATCGCATCTCCCCTACTCAAAATGATAGGAA
TGACACACTAGAGAATCCCT

Downstream 100 bases:

>100_bases
TTACACTGGGGAAAGATCGCTGATATATATTGCCACCAGATGATGCCGCCTCACTTATGTTGAAGATTACCCAACGCACC
TCCATTCCTCTCAGTGAGAT

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSEWHLYILRTRNGALYTGVTTDVARRLEEHTYSKKGAKFLRSKGPLQLVYQQPVGSRSEAQRLEYQIKQLSKQQKETFI
ATHGS

Sequences:

>Translated_85_residues
MSEWHLYILRTRNGALYTGVTTDVARRLEEHTYSKKGAKFLRSKGPLQLVYQQPVGSRSEAQRLEYQIKQLSKQQKETFI
ATHGS
>Mature_84_residues
SEWHLYILRTRNGALYTGVTTDVARRLEEHTYSKKGAKFLRSKGPLQLVYQQPVGSRSEAQRLEYQIKQLSKQQKETFIA
THGS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=81, Percent_Identity=56.7901234567901, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 9840; Mature: 9709

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEWHLYILRTRNGALYTGVTTDVARRLEEHTYSKKGAKFLRSKGPLQLVYQQPVGSRSE
CCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AQRLEYQIKQLSKQQKETFIATHGS
HHHHHHHHHHHHHHHHHHEEEECCC
>Mature Secondary Structure 
SEWHLYILRTRNGALYTGVTTDVARRLEEHTYSKKGAKFLRSKGPLQLVYQQPVGSRSE
CCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AQRLEYQIKQLSKQQKETFIATHGS
HHHHHHHHHHHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA