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The map label for this gene is yaeJ [C]

Identifier: 158334444

GI number: 158334444

Start: 1253484

End: 1253909

Strand: Reverse

Name: yaeJ [C]

Synonym: AM1_1265

Alternate gene names: 158334444

Gene position: 1253909-1253484 (Counterclockwise)

Preceding gene: 158334445

Following gene: 158334443

Centisome position: 19.28

GC content: 51.17

Gene sequence:

>426_bases
ATGTTGAAGATTACCCAACGCACCTCCATTCCTCTCAGTGAGATTGAGTTGAGTCCCATCCGTTCTCAGGGAGCTGGAGG
ACAAAACGTCAACAAAGTGGCCTCTGCGATCCATCTACGGTTCGATATCGATGCCTCCTCCCTATCTCCCCTGTACAAAG
AGCGCCTTCTCAACCTGGGCGATAGACGCATCACCAAAGAAGGCATCATTATTATCAAAGCCCAGCAACATCGCACCCAA
CAGCAAAACCGGGAAGATGCCCTCAACCGCCTGCAGATATTACTGCAAAGCGTGACCACAACCCCCAAAAAGAGGAAACC
CACGAAGCGCTCCTATGGTGCCAAGCAACGGCGGTTGGATGGCAAAAGCAAACGCAGCAAGCTGAAAAAGCTCAGGGGTA
ATATCAAGTCCGAACTGGACTCCTAA

Upstream 100 bases:

>100_bases
CGAAGCAACAAAAAGAGACCTTTATCGCCACTCACGGCTCTTGATTACACTGGGGAAAGATCGCTGATATATATTGCCAC
CAGATGATGCCGCCTCACTT

Downstream 100 bases:

>100_bases
TCATTAACTCAAACCTAACTGCACAGAGGACACCATGCCAGGATTACTGCCCAATATTGATCCAGATGGACTTTTGGAAT
ATTCAGTGGTCTACACAGAC

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLKITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASSLSPLYKERLLNLGDRRITKEGIIIIKAQQHRTQ
QQNREDALNRLQILLQSVTTTPKKRKPTKRSYGAKQRRLDGKSKRSKLKKLRGNIKSELDS

Sequences:

>Translated_141_residues
MLKITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASSLSPLYKERLLNLGDRRITKEGIIIIKAQQHRTQ
QQNREDALNRLQILLQSVTTTPKKRKPTKRSYGAKQRRLDGKSKRSKLKKLRGNIKSELDS
>Mature_141_residues
MLKITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASSLSPLYKERLLNLGDRRITKEGIIIIKAQQHRTQ
QQNREDALNRLQILLQSVTTTPKKRKPTKRSYGAKQRRLDGKSKRSKLKKLRGNIKSELDS

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=137, Percent_Identity=48.9051094890511, Blast_Score=142, Evalue=9e-36,
Organism=Drosophila melanogaster, GI19921098, Length=89, Percent_Identity=37.0786516853933, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16010; Mature: 16010

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASSLSPLYKERLLNLG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHCCHHHHHHHHCCC
DRRITKEGIIIIKAQQHRTQQQNREDALNRLQILLQSVTTTPKKRKPTKRSYGAKQRRLD
CCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHCC
GKSKRSKLKKLRGNIKSELDS
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASSLSPLYKERLLNLG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHCCHHHHHHHHCCC
DRRITKEGIIIIKAQQHRTQQQNREDALNRLQILLQSVTTTPKKRKPTKRSYGAKQRRLD
CCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHCC
GKSKRSKLKKLRGNIKSELDS
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]