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The map label for this gene is ygaF [H]

Identifier: 158334340

GI number: 158334340

Start: 1128485

End: 1128955

Strand: Reverse

Name: ygaF [H]

Synonym: AM1_1161

Alternate gene names: 158334340

Gene position: 1128955-1128485 (Counterclockwise)

Preceding gene: 158334350

Following gene: 158334339

Centisome position: 17.36

GC content: 43.1

Gene sequence:

>471_bases
ATGACATTGGACATTGGCGATTACGCTCCAGAATTCACCTTACCCAATGCGGATGGGGAATCCATTGACCTTAAACGTTT
TCGAGGACAATGGGTGGTGCTTTACTTTTATCCCCGGGACAATACGCCTGGCTGTACCAAAGAAGCTTGTGGATTTCGCG
ATCAGTACGAGACCTATCAAACTGAGCAGGTTGTTATCCTAGGGGTTAGCGGAGATGACGCCAAATCCCATCAGAAATTT
ATCAATAAACAAAATTTGCCTTTCCAATTACTCTCCGATCTCGATTTCAATGTGGCAAAATCTTATGAAGCTTATGGACC
CAAAAAGTTTATGGGTAAAGAATATGAAGGGATCTATCGACATTCTTTTCTCATTGATCCGGACGGCAAGCTAGCGAAGA
TTTATCGAAAGGTCAAGGCTGCCGATCACGCCACAGATGTGTTGCAAGATTTAGAATTACTGAGAAAGTAG

Upstream 100 bases:

>100_bases
TAATGGAACGGGGATTGATGAGGCTCAACCGCTGTCAATCCGCAACTTGGTTTTAGCCCTACCGGCTGTTTCTCTATGCT
CTCTTTACGCTCAGAAGATT

Downstream 100 bases:

>100_bases
ATATTAAACTCACTCTCTTTTAGGTTTATTTTTAGTATCTAAAACGGAGTTCTTGCACAAAAGATTAATGCATAATTTTA
TAGATTTGCCTTGATATATT

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTLDIGDYAPEFTLPNADGESIDLKRFRGQWVVLYFYPRDNTPGCTKEACGFRDQYETYQTEQVVILGVSGDDAKSHQKF
INKQNLPFQLLSDLDFNVAKSYEAYGPKKFMGKEYEGIYRHSFLIDPDGKLAKIYRKVKAADHATDVLQDLELLRK

Sequences:

>Translated_156_residues
MTLDIGDYAPEFTLPNADGESIDLKRFRGQWVVLYFYPRDNTPGCTKEACGFRDQYETYQTEQVVILGVSGDDAKSHQKF
INKQNLPFQLLSDLDFNVAKSYEAYGPKKFMGKEYEGIYRHSFLIDPDGKLAKIYRKVKAADHATDVLQDLELLRK
>Mature_155_residues
TLDIGDYAPEFTLPNADGESIDLKRFRGQWVVLYFYPRDNTPGCTKEACGFRDQYETYQTEQVVILGVSGDDAKSHQKFI
NKQNLPFQLLSDLDFNVAKSYEAYGPKKFMGKEYEGIYRHSFLIDPDGKLAKIYRKVKAADHATDVLQDLELLRK

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=45.3333333333333, Blast_Score=140, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI32565831, Length=143, Percent_Identity=34.965034965035, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193204376, Length=143, Percent_Identity=34.965034965035, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322180, Length=163, Percent_Identity=38.0368098159509, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17943; Mature: 17812

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDIGDYAPEFTLPNADGESIDLKRFRGQWVVLYFYPRDNTPGCTKEACGFRDQYETYQ
CCCCCCCCCCCCCCCCCCCCCEEHEEECCCEEEEEEEECCCCCCCCHHHCCCCHHHHHCC
TEQVVILGVSGDDAKSHQKFINKQNLPFQLLSDLDFNVAKSYEAYGPKKFMGKEYEGIYR
CCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCEEE
HSFLIDPDGKLAKIYRKVKAADHATDVLQDLELLRK
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLDIGDYAPEFTLPNADGESIDLKRFRGQWVVLYFYPRDNTPGCTKEACGFRDQYETYQ
CCCCCCCCCCCCCCCCCCCCEEHEEECCCEEEEEEEECCCCCCCCHHHCCCCHHHHHCC
TEQVVILGVSGDDAKSHQKFINKQNLPFQLLSDLDFNVAKSYEAYGPKKFMGKEYEGIYR
CCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCEEE
HSFLIDPDGKLAKIYRKVKAADHATDVLQDLELLRK
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]