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The map label for this gene is nudF [H]

Identifier: 158334339

GI number: 158334339

Start: 1127854

End: 1128234

Strand: Reverse

Name: nudF [H]

Synonym: AM1_1160

Alternate gene names: 158334339

Gene position: 1128234-1127854 (Counterclockwise)

Preceding gene: 158334340

Following gene: 158334336

Centisome position: 17.35

GC content: 42.26

Gene sequence:

>381_bases
ATGCCGATCCTTGAAGATGGACAAATCGTATTGGTTAAACGTCGGGATAATGGCCTATGGAGCTTACCGGGCGGCATGGT
GGATTGGGGTGAAAATATTCAGCAAAGTATCAAAAGAGAACTCCATGAGGAAACGGGGTTATCACTCACAACAATGGGAC
GATTTGTGGGGGTATACTCAGACCCCGATCGTGATCCACGATTACATTCCATTTGTTTAGCTTTTGAAATTAAGGTTGAA
GGGAAATTGCAAGTGAACGATATAAATGAAATATCTGAAGTGCAATCTTTTTCCCTAGATGAAGCGATGAATATGCCTTT
AAGTCATGATCATACCCAGCAGTTGCAAGACTACCTCCAAGGTGAATTAGTGATTCGCTAG

Upstream 100 bases:

>100_bases
CTAGCCTACCTCTGTATTTTTGACTATGAAACGTTTCGCATACATGGTTCAGACGGTGCTGGGCCTTCTCTTTAGACACC
CATTATTAGGGGTGTGTTTA

Downstream 100 bases:

>100_bases
CTCTAGAAAAGCAGCGACCGATCACTTTTCTGCTGACGTAAATGTAGAAGTCCTATCCCTTGGAGTTGGGGCTGTAAAAT
AACCCGGTCTAGTAGTTTTG

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPILEDGQIVLVKRRDNGLWSLPGGMVDWGENIQQSIKRELHEETGLSLTTMGRFVGVYSDPDRDPRLHSICLAFEIKVE
GKLQVNDINEISEVQSFSLDEAMNMPLSHDHTQQLQDYLQGELVIR

Sequences:

>Translated_126_residues
MPILEDGQIVLVKRRDNGLWSLPGGMVDWGENIQQSIKRELHEETGLSLTTMGRFVGVYSDPDRDPRLHSICLAFEIKVE
GKLQVNDINEISEVQSFSLDEAMNMPLSHDHTQQLQDYLQGELVIR
>Mature_125_residues
PILEDGQIVLVKRRDNGLWSLPGGMVDWGENIQQSIKRELHEETGLSLTTMGRFVGVYSDPDRDPRLHSICLAFEIKVEG
KLQVNDINEISEVQSFSLDEAMNMPLSHDHTQQLQDYLQGELVIR

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 14362; Mature: 14230

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILEDGQIVLVKRRDNGLWSLPGGMVDWGENIQQSIKRELHEETGLSLTTMGRFVGVYS
CCCCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHEEEECC
DPDRDPRLHSICLAFEIKVEGKLQVNDINEISEVQSFSLDEAMNMPLSHDHTQQLQDYLQ
CCCCCCCCEEEEEEEEEEECCEEEECCCHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHC
GELVIR
CCEEEC
>Mature Secondary Structure 
PILEDGQIVLVKRRDNGLWSLPGGMVDWGENIQQSIKRELHEETGLSLTTMGRFVGVYS
CCCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHEEEECC
DPDRDPRLHSICLAFEIKVEGKLQVNDINEISEVQSFSLDEAMNMPLSHDHTQQLQDYLQ
CCCCCCCCEEEEEEEEEEECCEEEECCCHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHC
GELVIR
CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]