| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is cca [H]
Identifier: 158334195
GI number: 158334195
Start: 979332
End: 982040
Strand: Direct
Name: cca [H]
Synonym: AM1_1013
Alternate gene names: 158334195
Gene position: 979332-982040 (Clockwise)
Preceding gene: 158334194
Following gene: 158334196
Centisome position: 15.06
GC content: 50.31
Gene sequence:
>2709_bases ATGGATATCGTTTTATGTCATCGCACAGCAGACTTTGACACCTTAGGAGCCGCTGTCGGTATCACTCATTTATATCCGGG AACTCGAATTGTCCTGTGTGGGGGAGCCCATCCAACGGTTCGGGAGTTTCTAGGGCTCTACAGGGATCAATTTCCTCTAA TTGAGCATCGGGCGATTAATGCTGAACAGCTTCGCTCAATTACGATCGTCGATGCACAACGGCGCCAGCTTTTAGGACCC GCAGCAAATTGGCTTGATCTTCCTCAAGTCCAAGTCAAAATTTACGATCACCATCTATCCACAACCGGGAATATTGAAGC CGATCAGTTGATACTGGAAGCAGTGGGCGCAGCCACCACCCTAGTCGTGGAAGAGTTGCAGCGAAAACACCTGCAGATGC CTGTGACCGTGGCAACGGTGATGGCTTTGGGAATTCATGTGGATACCGGATCTCTCACTTACCCAAGTTCGACCGTGCGA GATGCGGCTGCTTTGACTTGGTTAATGACTCAAGGGGCCAATCAACGGGCGATTGCAGAGTACACCGAACCCGTTTTTTC CTCAGATTTACAGGATTTGCTGACCCAAGCCTTGGAATTAACACAAACCCAGTCTAGACATGGAAATTCTTTGTCCTGGG TGATGTTGAAGACAGAACGTTATGTGCCTGGTTTGGCCAGCCTGACCTCACAACTGATGCTTCTGCATGAGAGTGACAGT TTTTTGCTGGGGCATGTCTATAGCAAGGCTGAAACCCAGAAACTAAGTGTGATAGGTCGTTCTCGGGTTGAAGGAGTTGA CCTGAATGGACTATTGCAGCCCCTAGGAGGTGGGGGACATGCCCGGGCAGCTGCAGTGACGTTAAAAACAGAAACGCCCC AAAGGGTAATGGAGGACTTAGTGGCAACGCTGCTGGAGCAGATGCCCTTACCGCCTATGGCGGCAGACTTAATGTCTTCC CCCGTCCGAACCATTCGCCCCACGACCACCATTGATCAAGCCCGGCGAATTTTGTTGCGCTATGGCCATTCTGGGCTGTC AGTGGTGAATGACCAAGATCAGTTGGTAGGGATTTTATCTCGGCGTGATCTCGATATTGCCCTCCATCATGGCTTTGGAC ATGCTCCAGTTAAAGGTTATATGACGGCCCCAGTTCGCACGATTAGTTTGGGGACCTCTCTGCCTGAGATTGAATTGATG ATGGTGACCTACGATATTGGCCGGTTGCCAGTGGTGGAACAGGGGCAATTGGTGGGGATCGTAACCCGTACGGATATCCT GCGCCAGCTACATCAACTGAAGCATCCAGTACTCCCGACCCATCAACAAGTAGTGCGCACATCCATTCAGGAACAACTGC GATCGCAACTGTCTCCCACATTGCAAACCCTGTTATCGACGGCGGCAGATGCGGCAGCAGCTCAAGGCTGGCAGCTGTAT TTAGTGGGGGGAGCGGTACGGGATTTGCTGCTCTCAGGCCCAAACCAGCCCTTTAGGGTGAAAGAGTTTGATCTCGTTGT GGATGGCGTTGAAACCACTGCAAAAGCGGCAGGGGTTTCTCTCGCCCAAACCTTACAGTCAGACTATCCTGAGACCCAAT TGCAGGTTTATGGCCAGTTCCAAACCGCGGCTCTGATTTGGCCCTCTGGATCCGAGTTAGCTGGATTTTCGGTGGATATT GCGACAGCGCGCAGTGAGTTTTACCCTTATCCTGCCGCCAATCCAGAGGTAGAAGCAAGCTCCATTCGTCAAGACCTCTA TCGGCGAGACTTTACCATCAATGCTTTGGCCGTTCGATTAACACGTCAGGGGTTTCAATCCCATCCCAGTGGCGAGTTAC TAGATTTCTTCGGAGGCGTAGTGGATCTGCAGGATCGCCAAATCCGAGTTCTGCATCCCAACAGCTTTATTGAAGATCCG ACTCGAATTTTTCGAGCCGTACGGTTTGCAACTCGACTGGAGTTTGAGATTGGAGAACAGACCGAGGCCTATATTCGCCA TGCGATCGCAAGTGGTATCTATACACAAGTCCAGGCAGAAAAGGATAAAGCGCCAGCCTTGCAATCCCGCCTCAAAAACG AACTTAAGTACATTTTCAAAACATCTCATTGGGCAAGAGCGCTCAATTTACTGGCTGACTTAGAGGCATTGCAGTGTATC CATCCTCAGCTCCAAATCAATCAACACTGGTGGCAACGGGTGCGACTGGCCATCTGTTGGTACAACACATTTGAACCCGC TCGCTTAGAGGTGCCTGTTTGGTTGTTGATTTTAGAAGTATTGCTGACTGCTTTACCCCCTACAGAGCGCTGTGTAGTGG CCGCTAACTTACATTTATCAGACTCCACTCAACAGAGACTTCAAAATCTGGATGGGGTATTGCAAGAACTTGAAAAGCAA CCGGAGCAAGCCTCCCCTAGCCAACTCACAGATTTTTTAAAGTCCCACAACATTTCCGGATTGATTTTAGTCGGCATCTA TAGCAATGTCAGGATTCGCAAGTGGGTGTGGCAGTACCTATCGGATTGGTCGAGCCGCAAACCATTACTGACAGGTAAAG ACTTGATTCAGTTAGGGTATCGACCGGGGCGAGAATTTAAATCGATGTTGGCAGCCCTTGGGGCTGCTACCTTAGACGGT GAACTCAAGGACCGAGATCAAGCACAAGCCTGGGTAAAAGCACGTTTTCCCATCCCTCCTAAAACGTAG
Upstream 100 bases:
>100_bases GCATTTGAGAGTGCCTACGCCAGATAATCATACCCTAAAAGAGGAGATTTACTTGACTGAAGTCGATGGAGCCGTAGGCG TTGGGATGTAAATAGGCTGG
Downstream 100 bases:
>100_bases GGTGAAAATTATGCCTGCTATCCTCCCTTGTGTCTGGTAGAGTCATCATACGAATTGCTGGAAACCTTCATGCCCAAGCT GCACCTGGGACCCAAATGGC
Product: polyA polymerase
Products: NA
Alternate protein names: CCA-adding enzyme; tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl-transferase; tRNA nucleotidyltransferase; tRNA-NT; 2'-nucleotidase; 2',3'-cyclic phosphodiesterase; Phosphatase [H]
Number of amino acids: Translated: 902; Mature: 902
Protein sequence:
>902_residues MDIVLCHRTADFDTLGAAVGITHLYPGTRIVLCGGAHPTVREFLGLYRDQFPLIEHRAINAEQLRSITIVDAQRRQLLGP AANWLDLPQVQVKIYDHHLSTTGNIEADQLILEAVGAATTLVVEELQRKHLQMPVTVATVMALGIHVDTGSLTYPSSTVR DAAALTWLMTQGANQRAIAEYTEPVFSSDLQDLLTQALELTQTQSRHGNSLSWVMLKTERYVPGLASLTSQLMLLHESDS FLLGHVYSKAETQKLSVIGRSRVEGVDLNGLLQPLGGGGHARAAAVTLKTETPQRVMEDLVATLLEQMPLPPMAADLMSS PVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILSRRDLDIALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELM MVTYDIGRLPVVEQGQLVGIVTRTDILRQLHQLKHPVLPTHQQVVRTSIQEQLRSQLSPTLQTLLSTAADAAAAQGWQLY LVGGAVRDLLLSGPNQPFRVKEFDLVVDGVETTAKAAGVSLAQTLQSDYPETQLQVYGQFQTAALIWPSGSELAGFSVDI ATARSEFYPYPAANPEVEASSIRQDLYRRDFTINALAVRLTRQGFQSHPSGELLDFFGGVVDLQDRQIRVLHPNSFIEDP TRIFRAVRFATRLEFEIGEQTEAYIRHAIASGIYTQVQAEKDKAPALQSRLKNELKYIFKTSHWARALNLLADLEALQCI HPQLQINQHWWQRVRLAICWYNTFEPARLEVPVWLLILEVLLTALPPTERCVVAANLHLSDSTQQRLQNLDGVLQELEKQ PEQASPSQLTDFLKSHNISGLILVGIYSNVRIRKWVWQYLSDWSSRKPLLTGKDLIQLGYRPGREFKSMLAALGAATLDG ELKDRDQAQAWVKARFPIPPKT
Sequences:
>Translated_902_residues MDIVLCHRTADFDTLGAAVGITHLYPGTRIVLCGGAHPTVREFLGLYRDQFPLIEHRAINAEQLRSITIVDAQRRQLLGP AANWLDLPQVQVKIYDHHLSTTGNIEADQLILEAVGAATTLVVEELQRKHLQMPVTVATVMALGIHVDTGSLTYPSSTVR DAAALTWLMTQGANQRAIAEYTEPVFSSDLQDLLTQALELTQTQSRHGNSLSWVMLKTERYVPGLASLTSQLMLLHESDS FLLGHVYSKAETQKLSVIGRSRVEGVDLNGLLQPLGGGGHARAAAVTLKTETPQRVMEDLVATLLEQMPLPPMAADLMSS PVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILSRRDLDIALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELM MVTYDIGRLPVVEQGQLVGIVTRTDILRQLHQLKHPVLPTHQQVVRTSIQEQLRSQLSPTLQTLLSTAADAAAAQGWQLY LVGGAVRDLLLSGPNQPFRVKEFDLVVDGVETTAKAAGVSLAQTLQSDYPETQLQVYGQFQTAALIWPSGSELAGFSVDI ATARSEFYPYPAANPEVEASSIRQDLYRRDFTINALAVRLTRQGFQSHPSGELLDFFGGVVDLQDRQIRVLHPNSFIEDP TRIFRAVRFATRLEFEIGEQTEAYIRHAIASGIYTQVQAEKDKAPALQSRLKNELKYIFKTSHWARALNLLADLEALQCI HPQLQINQHWWQRVRLAICWYNTFEPARLEVPVWLLILEVLLTALPPTERCVVAANLHLSDSTQQRLQNLDGVLQELEKQ PEQASPSQLTDFLKSHNISGLILVGIYSNVRIRKWVWQYLSDWSSRKPLLTGKDLIQLGYRPGREFKSMLAALGAATLDG ELKDRDQAQAWVKARFPIPPKT >Mature_902_residues MDIVLCHRTADFDTLGAAVGITHLYPGTRIVLCGGAHPTVREFLGLYRDQFPLIEHRAINAEQLRSITIVDAQRRQLLGP AANWLDLPQVQVKIYDHHLSTTGNIEADQLILEAVGAATTLVVEELQRKHLQMPVTVATVMALGIHVDTGSLTYPSSTVR DAAALTWLMTQGANQRAIAEYTEPVFSSDLQDLLTQALELTQTQSRHGNSLSWVMLKTERYVPGLASLTSQLMLLHESDS FLLGHVYSKAETQKLSVIGRSRVEGVDLNGLLQPLGGGGHARAAAVTLKTETPQRVMEDLVATLLEQMPLPPMAADLMSS PVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILSRRDLDIALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELM MVTYDIGRLPVVEQGQLVGIVTRTDILRQLHQLKHPVLPTHQQVVRTSIQEQLRSQLSPTLQTLLSTAADAAAAQGWQLY LVGGAVRDLLLSGPNQPFRVKEFDLVVDGVETTAKAAGVSLAQTLQSDYPETQLQVYGQFQTAALIWPSGSELAGFSVDI ATARSEFYPYPAANPEVEASSIRQDLYRRDFTINALAVRLTRQGFQSHPSGELLDFFGGVVDLQDRQIRVLHPNSFIEDP TRIFRAVRFATRLEFEIGEQTEAYIRHAIASGIYTQVQAEKDKAPALQSRLKNELKYIFKTSHWARALNLLADLEALQCI HPQLQINQHWWQRVRLAICWYNTFEPARLEVPVWLLILEVLLTALPPTERCVVAANLHLSDSTQQRLQNLDGVLQELEKQ PEQASPSQLTDFLKSHNISGLILVGIYSNVRIRKWVWQYLSDWSSRKPLLTGKDLIQLGYRPGREFKSMLAALGAATLDG ELKDRDQAQAWVKARFPIPPKT
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG0617
COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789436, Length=251, Percent_Identity=31.4741035856574, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012006 - InterPro: IPR003607 - InterPro: IPR002646 [H]
Pfam domain/function: PF01743 PolyA_pol [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 100331; Mature: 100331
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVLCHRTADFDTLGAAVGITHLYPGTRIVLCGGAHPTVREFLGLYRDQFPLIEHRAIN CCEEEEECCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHCCCC AEQLRSITIVDAQRRQLLGPAANWLDLPQVQVKIYDHHLSTTGNIEADQLILEAVGAATT HHHHCEEEEEEHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH LVVEELQRKHLQMPVTVATVMALGIHVDTGSLTYPSSTVRDAAALTWLMTQGANQRAIAE HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH YTEPVFSSDLQDLLTQALELTQTQSRHGNSLSWVMLKTERYVPGLASLTSQLMLLHESDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCC FLLGHVYSKAETQKLSVIGRSRVEGVDLNGLLQPLGGGGHARAAAVTLKTETPQRVMEDL EEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHH VATLLEQMPLPPMAADLMSSPVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILS HHHHHHHCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH RRDLDIALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELMMVTYDIGRLPVVEQGQLVGI CCCCEEEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEEEECCCCCEECCCCEEEE VTRTDILRQLHQLKHPVLPTHQQVVRTSIQEQLRSQLSPTLQTLLSTAADAAAAQGWQLY EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LVGGAVRDLLLSGPNQPFRVKEFDLVVDGVETTAKAAGVSLAQTLQSDYPETQLQVYGQF EECHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECE QTAALIWPSGSELAGFSVDIATARSEFYPYPAANPEVEASSIRQDLYRRDFTINALAVRL EEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH TRQGFQSHPSGELLDFFGGVVDLQDRQIRVLHPNSFIEDPTRIFRAVRFATRLEFEIGEQ HHHHHHCCCCCCHHHHHCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCH TEAYIRHAIASGIYTQVQAEKDKAPALQSRLKNELKYIFKTSHWARALNLLADLEALQCI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPQLQINQHWWQRVRLAICWYNTFEPARLEVPVWLLILEVLLTALPPTERCVVAANLHLS CCHHEECHHHHHHHEEEEEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECC DSTQQRLQNLDGVLQELEKQPEQASPSQLTDFLKSHNISGLILVGIYSNVRIRKWVWQYL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH SDWSSRKPLLTGKDLIQLGYRPGREFKSMLAALGAATLDGELKDRDQAQAWVKARFPIPP HHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCC KT CC >Mature Secondary Structure MDIVLCHRTADFDTLGAAVGITHLYPGTRIVLCGGAHPTVREFLGLYRDQFPLIEHRAIN CCEEEEECCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHCCCC AEQLRSITIVDAQRRQLLGPAANWLDLPQVQVKIYDHHLSTTGNIEADQLILEAVGAATT HHHHCEEEEEEHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH LVVEELQRKHLQMPVTVATVMALGIHVDTGSLTYPSSTVRDAAALTWLMTQGANQRAIAE HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH YTEPVFSSDLQDLLTQALELTQTQSRHGNSLSWVMLKTERYVPGLASLTSQLMLLHESDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCC FLLGHVYSKAETQKLSVIGRSRVEGVDLNGLLQPLGGGGHARAAAVTLKTETPQRVMEDL EEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHH VATLLEQMPLPPMAADLMSSPVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILS HHHHHHHCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH RRDLDIALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELMMVTYDIGRLPVVEQGQLVGI CCCCEEEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEEEECCCCCEECCCCEEEE VTRTDILRQLHQLKHPVLPTHQQVVRTSIQEQLRSQLSPTLQTLLSTAADAAAAQGWQLY EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LVGGAVRDLLLSGPNQPFRVKEFDLVVDGVETTAKAAGVSLAQTLQSDYPETQLQVYGQF EECHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECE QTAALIWPSGSELAGFSVDIATARSEFYPYPAANPEVEASSIRQDLYRRDFTINALAVRL EEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH TRQGFQSHPSGELLDFFGGVVDLQDRQIRVLHPNSFIEDPTRIFRAVRFATRLEFEIGEQ HHHHHHCCCCCCHHHHHCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCH TEAYIRHAIASGIYTQVQAEKDKAPALQSRLKNELKYIFKTSHWARALNLLADLEALQCI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPQLQINQHWWQRVRLAICWYNTFEPARLEVPVWLLILEVLLTALPPTERCVVAANLHLS CCHHEECHHHHHHHEEEEEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECC DSTQQRLQNLDGVLQELEKQPEQASPSQLTDFLKSHNISGLILVGIYSNVRIRKWVWQYL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH SDWSSRKPLLTGKDLIQLGYRPGREFKSMLAALGAATLDGELKDRDQAQAWVKARFPIPP HHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCC KT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA