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The map label for this gene is kaiB

Identifier: 158334177

GI number: 158334177

Start: 966382

End: 966696

Strand: Reverse

Name: kaiB

Synonym: AM1_0993

Alternate gene names: 158334177

Gene position: 966696-966382 (Counterclockwise)

Preceding gene: 158334178

Following gene: 158334176

Centisome position: 14.86

GC content: 40.63

Gene sequence:

>315_bases
ATGAGCTCTATCAGAAAAACCTATGTTCTTAAACTCTATGTTGCTGGCAACACCCCTAACTCTGTCAGGGCTTTAAGAAC
TTTAAATCATATTCTTGAAACTGAATTTCAGGGCGTTTATGCCCTAAAAGTGATTGATGTATTGAAAAATCCGCAACTGG
CTGAGGAAGACAAAATTTTAGCGACGCCAACCCTAGCAAAAGTTTTGCCCCCTCCCGTTCGCAAAATTATTGGTGATCTA
TCCGATCGTGAGCGAGTGCTGATTGGTTTAGATCTACTCTATGAAGAACTTTCTGATGGCATTATGGAGTACTAG

Upstream 100 bases:

>100_bases
GACCTTAATCGATATCATGGCCCATTTGTGTGAGATGTATCGTCGATCCATTCCCAAAACCCGTTAATTATTCAAGACCG
ATCAACCCTAATTCCCTGCC

Downstream 100 bases:

>100_bases
CCTACTTAATAAGGCGGCTTCAGCCCATATTCGACTTTAAAATTTTTTATTCATTTTGATGTAGATGAACAATGAAGAAA
AGTAATTTATCTCAGTATAA

Product: circadian clock protein KaiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSSIRKTYVLKLYVAGNTPNSVRALRTLNHILETEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKVLPPPVRKIIGDL
SDRERVLIGLDLLYEELSDGIMEY

Sequences:

>Translated_104_residues
MSSIRKTYVLKLYVAGNTPNSVRALRTLNHILETEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKVLPPPVRKIIGDL
SDRERVLIGLDLLYEELSDGIMEY
>Mature_103_residues
SSIRKTYVLKLYVAGNTPNSVRALRTLNHILETEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKVLPPPVRKIIGDLS
DRERVLIGLDLLYEELSDGIMEY

Specific function: Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of

COG id: NA

COG function: NA

Gene ontology:
GO:0007623: Circadian clock protein kaiB
GO:0048511: Circadian clock protein kaiB

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KAIB_ACAM1 (Q6L8L2)

Other databases:

- EMBL:   AB120712
- EMBL:   CP000828
- RefSeq:   YP_001515349.1
- ProteinModelPortal:   Q6L8L2
- SMR:   Q6L8L2
- GeneID:   5679819
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_0993
- HOGENOM:   HBG287137
- OMA:   YILKLYV
- ProtClustDB:   PRK09301
- BioCyc:   AMAR329726:AM1_0993-MONOMER
- HAMAP:   MF_01835
- InterPro:   IPR013474
- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10
- TIGRFAMs:   TIGR02654

Pfam domain/function: PF07689 KaiB; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 11709; Mature: 11578

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIRKTYVLKLYVAGNTPNSVRALRTLNHILETEFQGVYALKVIDVLKNPQLAEEDKIL
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEE
ATPTLAKVLPPPVRKIIGDLSDRERVLIGLDLLYEELSDGIMEY
ECCHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSIRKTYVLKLYVAGNTPNSVRALRTLNHILETEFQGVYALKVIDVLKNPQLAEEDKIL
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEE
ATPTLAKVLPPPVRKIIGDLSDRERVLIGLDLLYEELSDGIMEY
ECCHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA