| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333979
Identifier: 158333979
GI number: 158333979
Start: 772305
End: 772850
Strand: Reverse
Name: 158333979
Synonym: AM1_0793
Alternate gene names: NA
Gene position: 772850-772305 (Counterclockwise)
Preceding gene: 158333980
Following gene: 158333978
Centisome position: 11.88
GC content: 50.92
Gene sequence:
>546_bases ATGTCCTCCGAGAAGCCTAATCAACATCGAATATTACACCTGTTTGGTCTAATTGCTGGGGTCCTGATGCTGGGGTGTCA ACCCCTGAACCAAGCGACAGAGGCGACAACTCCCCAGCCAAAACCCTCCGTAGCGGTAGCCGCAACCCCTGGGCAACGGT TACCCATAACGGCCCAAGCCCAAATTAAAGACTACGTGGTGGAACTGGAAGTTGCCCAAACTCGCCAACAGCAAGCGACG GGATTAATGAGCCGAGACAGTTTGGCAGATAATCGTGGCATGTTATTCCCCTTCAGCCCTCCTCAAACCGTCAGCTTTTG GATGAAAAATGTCCTGATTGATTTGGACATGATTTTTTTACGCCAAGGGAAGGTCATTTCGATTCAGCACAGTGCTCCAC CCTGTACATCCATTCCTTGTCCGACCTATGGACCTCAAGGCGAAATCATTGATCAAGTGATTGAGCTTCGGGGGGGAAGA GCAGCTGAGCTTGGGATTCAGACAGGCGATCTCATCCCGATTCAGCCTGTTTCCCCTGAATCGTAA
Upstream 100 bases:
>100_bases GGGGAGTCGAATGTGATTGAAGTCTATATCCGCTATTTGCGGCTTAAGGTGCAGGTTGCCCCTGAAAAGCGTCTTATTCA TACTGTTCGTGGAGTTGGAT
Downstream 100 bases:
>100_bases AATTTTGCAGAATAGCCCCAAAATCTGGTGATTGTAACTTGACGGTTGGCAAGCATGCTCGCCAGGATGATACAAGTATT GAAACTGATTTAAATTTTTT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSSEKPNQHRILHLFGLIAGVLMLGCQPLNQATEATTPQPKPSVAVAATPGQRLPITAQAQIKDYVVELEVAQTRQQQAT GLMSRDSLADNRGMLFPFSPPQTVSFWMKNVLIDLDMIFLRQGKVISIQHSAPPCTSIPCPTYGPQGEIIDQVIELRGGR AAELGIQTGDLIPIQPVSPES
Sequences:
>Translated_181_residues MSSEKPNQHRILHLFGLIAGVLMLGCQPLNQATEATTPQPKPSVAVAATPGQRLPITAQAQIKDYVVELEVAQTRQQQAT GLMSRDSLADNRGMLFPFSPPQTVSFWMKNVLIDLDMIFLRQGKVISIQHSAPPCTSIPCPTYGPQGEIIDQVIELRGGR AAELGIQTGDLIPIQPVSPES >Mature_180_residues SSEKPNQHRILHLFGLIAGVLMLGCQPLNQATEATTPQPKPSVAVAATPGQRLPITAQAQIKDYVVELEVAQTRQQQATG LMSRDSLADNRGMLFPFSPPQTVSFWMKNVLIDLDMIFLRQGKVISIQHSAPPCTSIPCPTYGPQGEIIDQVIELRGGRA AELGIQTGDLIPIQPVSPES
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19620; Mature: 19489
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEKPNQHRILHLFGLIAGVLMLGCQPLNQATEATTPQPKPSVAVAATPGQRLPITAQA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEHH QIKDYVVELEVAQTRQQQATGLMSRDSLADNRGMLFPFSPPQTVSFWMKNVLIDLDMIFL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEE RQGKVISIQHSAPPCTSIPCPTYGPQGEIIDQVIELRGGRAAELGIQTGDLIPIQPVSPE CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCC S C >Mature Secondary Structure SSEKPNQHRILHLFGLIAGVLMLGCQPLNQATEATTPQPKPSVAVAATPGQRLPITAQA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEHH QIKDYVVELEVAQTRQQQATGLMSRDSLADNRGMLFPFSPPQTVSFWMKNVLIDLDMIFL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEE RQGKVISIQHSAPPCTSIPCPTYGPQGEIIDQVIELRGGRAAELGIQTGDLIPIQPVSPE CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA