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The map label for this gene is 158333799

Identifier: 158333799

GI number: 158333799

Start: 597315

End: 598019

Strand: Reverse

Name: 158333799

Synonym: AM1_0607

Alternate gene names: NA

Gene position: 598019-597315 (Counterclockwise)

Preceding gene: 158333800

Following gene: 158333792

Centisome position: 9.2

GC content: 45.96

Gene sequence:

>705_bases
ATGTATGCGATCTTCGATTGCATCCGAAACGATCCAGATCGAAATGTTTGGATCTGGCTGTTGCTATTCTTTAACTATCT
GGGTGCTGTCATTTATTTCGCGACGAGAATGCTACCGCGAATGAATACATCTTCAGCTCCCAGCTACTTTAAACGCTGGA
CTAAAGGACGAGAGTTACGAGCGGCCGAAGCTGCAGTCGTTAATATTGGTAAATCACACCAGTATGTTCAATTGGGTAAC
GTCTTGCTGGAGATGAGTAAAGTAACTCAAGCGGAGGAAGCCTTTCAAGAAGCCATTTCCAAAGAGCCCAACTATCTCGA
TGCCTTATGGGGACTCGCGTCAGTGGCAACAGCTGCCAAACGATGGGAGGAAGCTCAAGCTTATCTACAGCAGATTCTAT
CTCTTGATTCTGAATATAAACGGGGCGATGCTTCCTTGCTGCTGGGTAAGGTTCTCGTCGCCAGTGAACAGAGAGAACTA
GCAAAACCCCACCTCATTCAAGATATTAAAGCCTGGAGTCATCCTGAGGCAGCATTAATATTGGCTACGCTCCAAGCTGA
AGATGGTGAGAAACAGGATGCCTACGAAATCTTAAAAACAATGCTGTCAAAACTGAAAGCTTGCCCTGAGTTCTATTACA
GACAGCACCGCCATATCGCTAATAAAGCAGACCGAATGCTCCAGAGCCTAGAGAAGGAACTCTAG

Upstream 100 bases:

>100_bases
AATTCGATCACCTAAAGGTTGGAAATGGGAAACCTAAGGGTAATTCATAAGACTACCTTTGATGTTTCATATTGTTGTAT
TTGCCACAACGGGTTTTTGG

Downstream 100 bases:

>100_bases
GAGACAACAATTTAATCCAAAATTTAGCCACCTAGGCGGGTAGCTAGCATAGGCACACCCCCTGCTGGCGTAAAGGTAAT
TCCCCGCCGAACGGGTTGAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MYAIFDCIRNDPDRNVWIWLLLFFNYLGAVIYFATRMLPRMNTSSAPSYFKRWTKGRELRAAEAAVVNIGKSHQYVQLGN
VLLEMSKVTQAEEAFQEAISKEPNYLDALWGLASVATAAKRWEEAQAYLQQILSLDSEYKRGDASLLLGKVLVASEQREL
AKPHLIQDIKAWSHPEAALILATLQAEDGEKQDAYEILKTMLSKLKACPEFYYRQHRHIANKADRMLQSLEKEL

Sequences:

>Translated_234_residues
MYAIFDCIRNDPDRNVWIWLLLFFNYLGAVIYFATRMLPRMNTSSAPSYFKRWTKGRELRAAEAAVVNIGKSHQYVQLGN
VLLEMSKVTQAEEAFQEAISKEPNYLDALWGLASVATAAKRWEEAQAYLQQILSLDSEYKRGDASLLLGKVLVASEQREL
AKPHLIQDIKAWSHPEAALILATLQAEDGEKQDAYEILKTMLSKLKACPEFYYRQHRHIANKADRMLQSLEKEL
>Mature_234_residues
MYAIFDCIRNDPDRNVWIWLLLFFNYLGAVIYFATRMLPRMNTSSAPSYFKRWTKGRELRAAEAAVVNIGKSHQYVQLGN
VLLEMSKVTQAEEAFQEAISKEPNYLDALWGLASVATAAKRWEEAQAYLQQILSLDSEYKRGDASLLLGKVLVASEQREL
AKPHLIQDIKAWSHPEAALILATLQAEDGEKQDAYEILKTMLSKLKACPEFYYRQHRHIANKADRMLQSLEKEL

Specific function: Unknown

COG id: COG4700

COG function: function code S; Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26843; Mature: 26843

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAIFDCIRNDPDRNVWIWLLLFFNYLGAVIYFATRMLPRMNTSSAPSYFKRWTKGRELR
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
AAEAAVVNIGKSHQYVQLGNVLLEMSKVTQAEEAFQEAISKEPNYLDALWGLASVATAAK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RWEEAQAYLQQILSLDSEYKRGDASLLLGKVLVASEQRELAKPHLIQDIKAWSHPEAALI
HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LATLQAEDGEKQDAYEILKTMLSKLKACPEFYYRQHRHIANKADRMLQSLEKEL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYAIFDCIRNDPDRNVWIWLLLFFNYLGAVIYFATRMLPRMNTSSAPSYFKRWTKGRELR
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
AAEAAVVNIGKSHQYVQLGNVLLEMSKVTQAEEAFQEAISKEPNYLDALWGLASVATAAK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RWEEAQAYLQQILSLDSEYKRGDASLLLGKVLVASEQRELAKPHLIQDIKAWSHPEAALI
HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LATLQAEDGEKQDAYEILKTMLSKLKACPEFYYRQHRHIANKADRMLQSLEKEL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA