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The map label for this gene is yfbS [C]

Identifier: 158333785

GI number: 158333785

Start: 579654

End: 581450

Strand: Reverse

Name: yfbS [C]

Synonym: AM1_0593

Alternate gene names: 158333785

Gene position: 581450-579654 (Counterclockwise)

Preceding gene: 158333786

Following gene: 158333782

Centisome position: 8.94

GC content: 50.64

Gene sequence:

>1797_bases
ATGGAGCCAATTTTTCAGACCCTTTTGGTGACAGGACTGACATTACTCTGTTTTGTATTTGAATGGTTACCTCCAGATCT
GACAGCAATCTGCGTTATGGTCGTCCTCATGCTGCTGGGACTCGTCACCACAGCAGAAGGGTTATCAGGATTCAGTAATC
CCGCCACCATCACCGTAATGGCCATGTTTATTCTTAGTTCAGGCATTGCCCGGACTGGAGCCATTCAAATGGCCAGCGAA
TTTTTGCTCAAATGGGGAGGTAAACGCCCCGCCCGACACATGCTGATTATGGGGGCTGTCATCGGGCCATTTACGGCCAT
CATTAACAATGTCGCGATTGTCTCCGTTTTCCTACCCGTTGTCGAAGATTGGAGTCGCCAACGCCGCATTCCAGTATCCA
AATTGATGATTCCCCTGTCTTACATCACAATTTTGGGGGGCATGATTACCGTTCTGGGCACCTCTACCAGCGTATTGGCC
AGTGGCTTATCGTCTGACCTAGGCTTAGGCTCTTTTGATATTTTCCAATTTACGGCCCTGAGTTTATGTACGTTTACCGC
TGGGCTCGTGTACATGGCCACGATTGGCCATCGTTTGTTACCTAATCGGAAGACCTCTTCCAGTCTGAGCCAAGGGTATG
GCCTGAAGGACTATGTCAGTGAAGTGGTGATTACCCCTCAGTCAGGTTTGGTGGGGCAAACCGTTCAGTCGAGTTTGATC
CAGCGAATTTATGACGTTGACATTTTGGAGTTGATCCATGATGACAACCATTTCCCTCAGCCCCTAGCGGACAAAACCCT
GTCAGCTGGCGATATTTTGCTCGTGCGTGGGGGACGGGAAGATCTGTTAAAAATTCGGGATGGCCAGGGTCTAGAAATTC
TGCCAGATGTGCAATTTGGCCAAAAATCCTGGCAAGCCGATTTAAGTGCAGAAGAAGGGGCAGCTGAAGCCATGGTACTG
GCGGATTCCAACCTGATTGGTTCGACCCTTAAAGATTTGCGGTTTCGCCAACGTTACAACTGTACGGTGTTGGCGATTCG
ACGGGGGCAAGAGTTAGTCCGAGATCGGTTAGGAAAGGTACGACTCCGATTTGGTGACTTGCTATTGGTGCAAGGACCGA
AGCAAAGTTTAGTGGGTTTGCAGACCAGCAAAGACCTATTGGTTATGGAACAGCGGGATGTTGAGAACCTGCGCCGGGAC
AAAGCGTGGATTGCGATCGCAATTGGTCTCCTGGTCGTGGGGGTCGCCGGCACCAAACGGTTTTCCATTGCCGTCACGGC
CTTAGCTGGGGTGATGCTAATGGTCTTGACGGGCTGTCTAAAACCAGGTGAACTCTATCGAGCGGTTCGTTGGGATGTGG
TATTCCTGCTCGCGGGCTTATTCCCCTTAGGCATTGCCATGAAAAAGTCTGGCGCCACCCAACTGTTAGCGGATCAATTA
ATTTCGGTGGGGGGACAATTATCCGGCTATTGGCTGCTCACGCTGTTTTTTGTCCTCACGGCACTGCTGACGGAGATTCT
CTCCAACAACGCCACGGTTATTTTGCTATTGCCTGTGGCAGTCCAAGTTGCCCAAGAGCTAGGCTACAACCCCTTTGCCT
TTATGTTTGTCGTCACGTTTGCAGCCTCGAACAGCTTTATGACCCCGATTGGTTATCAAACCAACACAATGGTCTACGGA
ACGGGAGGGTATCGCTTCCTCGATTTTCTGCGAGTGGGCGGCCCCTTAAGTCTGCTCATGGCGCTCATTACTCCGCCGCT
GATTATTCTGCTCTATGGTTTACAGCCTCTTTCCTGA

Upstream 100 bases:

>100_bases
ACTCACCATTTGCGAACCTACCGTAAGCATGGGCCAGTTCGCGGTTTAAGTTTGATGGCAAACCCCCAACTTCGGCGATT
TTTGGAGTGACGGTCCCTCT

Downstream 100 bases:

>100_bases
GTTCAGGCGTATATTCGTGTTTGGTGTTCAAGGGCTTTGCCATACAATTTGCCCCGAAGGATTGACATATCCCTCTCGGC
CTCCTGTTTTAACGAAAGCT

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MEPIFQTLLVTGLTLLCFVFEWLPPDLTAICVMVVLMLLGLVTTAEGLSGFSNPATITVMAMFILSSGIARTGAIQMASE
FLLKWGGKRPARHMLIMGAVIGPFTAIINNVAIVSVFLPVVEDWSRQRRIPVSKLMIPLSYITILGGMITVLGTSTSVLA
SGLSSDLGLGSFDIFQFTALSLCTFTAGLVYMATIGHRLLPNRKTSSSLSQGYGLKDYVSEVVITPQSGLVGQTVQSSLI
QRIYDVDILELIHDDNHFPQPLADKTLSAGDILLVRGGREDLLKIRDGQGLEILPDVQFGQKSWQADLSAEEGAAEAMVL
ADSNLIGSTLKDLRFRQRYNCTVLAIRRGQELVRDRLGKVRLRFGDLLLVQGPKQSLVGLQTSKDLLVMEQRDVENLRRD
KAWIAIAIGLLVVGVAGTKRFSIAVTALAGVMLMVLTGCLKPGELYRAVRWDVVFLLAGLFPLGIAMKKSGATQLLADQL
ISVGGQLSGYWLLTLFFVLTALLTEILSNNATVILLLPVAVQVAQELGYNPFAFMFVVTFAASNSFMTPIGYQTNTMVYG
TGGYRFLDFLRVGGPLSLLMALITPPLIILLYGLQPLS

Sequences:

>Translated_598_residues
MEPIFQTLLVTGLTLLCFVFEWLPPDLTAICVMVVLMLLGLVTTAEGLSGFSNPATITVMAMFILSSGIARTGAIQMASE
FLLKWGGKRPARHMLIMGAVIGPFTAIINNVAIVSVFLPVVEDWSRQRRIPVSKLMIPLSYITILGGMITVLGTSTSVLA
SGLSSDLGLGSFDIFQFTALSLCTFTAGLVYMATIGHRLLPNRKTSSSLSQGYGLKDYVSEVVITPQSGLVGQTVQSSLI
QRIYDVDILELIHDDNHFPQPLADKTLSAGDILLVRGGREDLLKIRDGQGLEILPDVQFGQKSWQADLSAEEGAAEAMVL
ADSNLIGSTLKDLRFRQRYNCTVLAIRRGQELVRDRLGKVRLRFGDLLLVQGPKQSLVGLQTSKDLLVMEQRDVENLRRD
KAWIAIAIGLLVVGVAGTKRFSIAVTALAGVMLMVLTGCLKPGELYRAVRWDVVFLLAGLFPLGIAMKKSGATQLLADQL
ISVGGQLSGYWLLTLFFVLTALLTEILSNNATVILLLPVAVQVAQELGYNPFAFMFVVTFAASNSFMTPIGYQTNTMVYG
TGGYRFLDFLRVGGPLSLLMALITPPLIILLYGLQPLS
>Mature_598_residues
MEPIFQTLLVTGLTLLCFVFEWLPPDLTAICVMVVLMLLGLVTTAEGLSGFSNPATITVMAMFILSSGIARTGAIQMASE
FLLKWGGKRPARHMLIMGAVIGPFTAIINNVAIVSVFLPVVEDWSRQRRIPVSKLMIPLSYITILGGMITVLGTSTSVLA
SGLSSDLGLGSFDIFQFTALSLCTFTAGLVYMATIGHRLLPNRKTSSSLSQGYGLKDYVSEVVITPQSGLVGQTVQSSLI
QRIYDVDILELIHDDNHFPQPLADKTLSAGDILLVRGGREDLLKIRDGQGLEILPDVQFGQKSWQADLSAEEGAAEAMVL
ADSNLIGSTLKDLRFRQRYNCTVLAIRRGQELVRDRLGKVRLRFGDLLLVQGPKQSLVGLQTSKDLLVMEQRDVENLRRD
KAWIAIAIGLLVVGVAGTKRFSIAVTALAGVMLMVLTGCLKPGELYRAVRWDVVFLLAGLFPLGIAMKKSGATQLLADQL
ISVGGQLSGYWLLTLFFVLTALLTEILSNNATVILLLPVAVQVAQELGYNPFAFMFVVTFAASNSFMTPIGYQTNTMVYG
TGGYRFLDFLRVGGPLSLLMALITPPLIILLYGLQPLS

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=588, Percent_Identity=27.0408163265306, Blast_Score=220, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI71988385, Length=149, Percent_Identity=34.2281879194631, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32565804, Length=149, Percent_Identity=34.2281879194631, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551790, Length=138, Percent_Identity=26.8115942028986, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64899; Mature: 64899

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIFQTLLVTGLTLLCFVFEWLPPDLTAICVMVVLMLLGLVTTAEGLSGFSNPATITVM
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AMFILSSGIARTGAIQMASEFLLKWGGKRPARHMLIMGAVIGPFTAIINNVAIVSVFLPV
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDWSRQRRIPVSKLMIPLSYITILGGMITVLGTSTSVLASGLSSDLGLGSFDIFQFTAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHH
SLCTFTAGLVYMATIGHRLLPNRKTSSSLSQGYGLKDYVSEVVITPQSGLVGQTVQSSLI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHEEECCCCCCCHHHHHHHHH
QRIYDVDILELIHDDNHFPQPLADKTLSAGDILLVRGGREDLLKIRDGQGLEILPDVQFG
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEECCHHHHHEECCCCCCEECCCCCCC
QKSWQADLSAEEGAAEAMVLADSNLIGSTLKDLRFRQRYNCTVLAIRRGQELVRDRLGKV
CHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHE
RLRFGDLLLVQGPKQSLVGLQTSKDLLVMEQRDVENLRRDKAWIAIAIGLLVVGVAGTKR
EEEECCEEEEECCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FSIAVTALAGVMLMVLTGCLKPGELYRAVRWDVVFLLAGLFPLGIAMKKSGATQLLADQL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ISVGGQLSGYWLLTLFFVLTALLTEILSNNATVILLLPVAVQVAQELGYNPFAFMFVVTF
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHH
AASNSFMTPIGYQTNTMVYGTGGYRFLDFLRVGGPLSLLMALITPPLIILLYGLQPLS
HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEPIFQTLLVTGLTLLCFVFEWLPPDLTAICVMVVLMLLGLVTTAEGLSGFSNPATITVM
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AMFILSSGIARTGAIQMASEFLLKWGGKRPARHMLIMGAVIGPFTAIINNVAIVSVFLPV
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDWSRQRRIPVSKLMIPLSYITILGGMITVLGTSTSVLASGLSSDLGLGSFDIFQFTAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHH
SLCTFTAGLVYMATIGHRLLPNRKTSSSLSQGYGLKDYVSEVVITPQSGLVGQTVQSSLI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHEEECCCCCCCHHHHHHHHH
QRIYDVDILELIHDDNHFPQPLADKTLSAGDILLVRGGREDLLKIRDGQGLEILPDVQFG
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEECCHHHHHEECCCCCCEECCCCCCC
QKSWQADLSAEEGAAEAMVLADSNLIGSTLKDLRFRQRYNCTVLAIRRGQELVRDRLGKV
CHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHE
RLRFGDLLLVQGPKQSLVGLQTSKDLLVMEQRDVENLRRDKAWIAIAIGLLVVGVAGTKR
EEEECCEEEEECCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FSIAVTALAGVMLMVLTGCLKPGELYRAVRWDVVFLLAGLFPLGIAMKKSGATQLLADQL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ISVGGQLSGYWLLTLFFVLTALLTEILSNNATVILLLPVAVQVAQELGYNPFAFMFVVTF
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHH
AASNSFMTPIGYQTNTMVYGTGGYRFLDFLRVGGPLSLLMALITPPLIILLYGLQPLS
HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]