| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333417
Identifier: 158333417
GI number: 158333417
Start: 191161
End: 191607
Strand: Reverse
Name: 158333417
Synonym: AM1_0189
Alternate gene names: NA
Gene position: 191607-191161 (Counterclockwise)
Preceding gene: 158333418
Following gene: 158333416
Centisome position: 2.95
GC content: 46.53
Gene sequence:
>447_bases ATGAGCAATACATCATTACAGCTTAAAATACGACCAGCCCATCTTGGATTATCAGCCCTGATTGGTGGCCAAGTTTCGCC CATAGCAACCTCACATGAAGCCAATGTTTGCTTCTACCTGGTCTGCCGAGATGCGGTGTATCAATACGGAAAAGGCAAAT TTGGGATTCCGCAATTAGTGATCGATAACTTTTCCTTGACCTGCTTGGCCAGGGAAGTAGTGATCACATCCAGGGATCCC AGAGGAGTAGAAACCATCATTTATGCTCAGGTTCATAAAACTTCACACCTTAGCGGTACTTCGGCAGAGTGCACCGACAA GTTGACTCATGCCCAAAAAGGATCCCTCTTAAGCTCGATTCAAAATTTGGCCGATGAAAGGGATCCCAAAACGGGTTCAG GCTTTGCCAAGAGTGGGCTAAATTGCGGGTCAATCACTCTAGTGTAG
Upstream 100 bases:
>100_bases CGATAGCCAGCTCTGATTTAATCTCGGCTTCTCGCTGTCTGGTTCGCTGGTTCCCTGACTGGGTTCAATGGTCAATCTTT GGAGGTATTCATCATGAGTA
Downstream 100 bases:
>100_bases GGATTCAAAAGTGACGTATCGATTGGTATAATTGGGCTATAGAGATTGACTTTGATCTCTCCTTGAGAAATCAAATCAAG ATGCATTGCTTAAAGCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSNTSLQLKIRPAHLGLSALIGGQVSPIATSHEANVCFYLVCRDAVYQYGKGKFGIPQLVIDNFSLTCLAREVVITSRDP RGVETIIYAQVHKTSHLSGTSAECTDKLTHAQKGSLLSSIQNLADERDPKTGSGFAKSGLNCGSITLV
Sequences:
>Translated_148_residues MSNTSLQLKIRPAHLGLSALIGGQVSPIATSHEANVCFYLVCRDAVYQYGKGKFGIPQLVIDNFSLTCLAREVVITSRDP RGVETIIYAQVHKTSHLSGTSAECTDKLTHAQKGSLLSSIQNLADERDPKTGSGFAKSGLNCGSITLV >Mature_147_residues SNTSLQLKIRPAHLGLSALIGGQVSPIATSHEANVCFYLVCRDAVYQYGKGKFGIPQLVIDNFSLTCLAREVVITSRDPR GVETIIYAQVHKTSHLSGTSAECTDKLTHAQKGSLLSSIQNLADERDPKTGSGFAKSGLNCGSITLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15806; Mature: 15675
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTSLQLKIRPAHLGLSALIGGQVSPIATSHEANVCFYLVCRDAVYQYGKGKFGIPQLV CCCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCEE IDNFSLTCLAREVVITSRDPRGVETIIYAQVHKTSHLSGTSAECTDKLTHAQKGSLLSSI ECCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHH QNLADERDPKTGSGFAKSGLNCGSITLV HHHHHHCCCCCCCCHHHCCCCCCEEEEC >Mature Secondary Structure SNTSLQLKIRPAHLGLSALIGGQVSPIATSHEANVCFYLVCRDAVYQYGKGKFGIPQLV CCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCEE IDNFSLTCLAREVVITSRDPRGVETIIYAQVHKTSHLSGTSAECTDKLTHAQKGSLLSSI ECCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHH QNLADERDPKTGSGFAKSGLNCGSITLV HHHHHHCCCCCCCCHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA