| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319023
Identifier: 158319023
GI number: 158319023
Start: 8930189
End: 8931589
Strand: Reverse
Name: 158319023
Synonym: Franean1_7306
Alternate gene names: NA
Gene position: 8931589-8930189 (Counterclockwise)
Preceding gene: 158319024
Following gene: 158319022
Centisome position: 99.44
GC content: 75.73
Gene sequence:
>1401_bases ATGATGACCTTCATCGGGTACCTCTTTCTGGCGCCCCTCTCGGCCGCGTTCTTCGGCTTTCTGGTGTGGCTGCTGCCCGC GATCGCGATGCGCGACGTGATCGGCCGAATGCGGATCCGGCCGTTCACGTTCTTCGTGACCGGCTACATCTTCATCGGCC TGATGAGCTTCTACCTGCTGGTCTTCTACGAGGACCATGAGGTCGCCCCGTTCCTCGGAACGGTCGCGTCGCTGGGCCTG GTGTGGGCGGTCCGGCGGTGGTGGCGGTCGCGGCGCGGCTCCCGCACGGTCGCCGGGTTCAACCGGCTGACGGGCCCCCG GCAGCGCTCGGGAGCGCCCGCCAGCGGGCCCGGCATCCCCCACCCGGGCCAGTGGGGCGTCCAGCCTGGCCAGCACGGCG TCCAGCCGGGGCAGTACGGCGTCCAGCCTGGCCAGTGGGGGGTCCAGCCGGGGCAGTACGGCGCCCAGCCTGGTCCGCAC AGGACCCACCCCGGCCAGTGGGGCGTCCAGCCTGGTCCGCACGGCGTCCAGCCCGGTGAGCACCCCGGTCCGTACGGCGG GCCCGGGTATCCGGGGGTGCCCGGGCAGACCACTCCGCCGGGATATCCGGCCCCGCCCGGCCAGGGGGGACATCCCGGCC ATCCGGGGGCCGCGGCCACGGGCGGTCCGCCTGGGTCCGTCGGCCAGTCGCCCGCGGATGGTGTCCAGCCGGGGGGGCCT GGCTGGACACCCGGCCAGGATGGCGAGCACCTGGATACGGCGGGCGCCGGCGAGCCACCCGCGCCGGGCAGGACCGGCCG GATCGCCGGCTATCCGCTCGCGGCGCCGCCGCCGGACTCGCCTTCCGGTCCGCCCGGATACCCGCCGCCGGAGCGCCCGG CACCCGGCGGACCGGCGGCGCCGACACCGGAGGCATCGGGTGGACCTGTGCCGAGTCCACCGGCGCCAGGCTCATCAGTG CCAGGCTCGCAGGTGCCCGGTTCACCGATGTCGGGTGGACCTGCGTCGAGTGGTCCGGTGCCTGGTGGACCAGTGCCGGG TGGTCCGCCGGGTCCGCCGTCAGGACGACCCGCGTCGGGTGGTCCCGAGCCGGATGGTCCGGTGTCAGGTGCGGGCGGAC CGGTGTCGGGTGGACCGGGCGCGGGCCCGCCGGCCTGGAGCGACGAGCCGGACATCGACCCGACCTGGCTGGAGTTCTTT GCCAGCGAGCCCGGCGGCCTGGGCACTGACGGTCCGGGCGCCGGTGGCCCGGGGGGAGGCGCGGGTCCGGCCGGTCCGGC CGGACCCGCGGGTGCGACCGGGCGAGGTGGTCCGGGCGGTCCGGTGGATTCCGCGGGATCCGTCGATCCCGAGGAGCCGG ACGGGCCGACCTCCGGTCCCCCTGACGACCGGAGGCCCTGA
Upstream 100 bases:
>100_bases GCACGTCGTGGCGATCACAGACCCCGTCGCGCCGGCACCGGCGTCGGCGGACCGGCCGGCCAGCTCCTGAGCCCGCCGGC CGTCGCGCGCCTCCGCCGCC
Downstream 100 bases:
>100_bases CCTCCGAGAGCGTCGCGTGGTCGGTTCTCCGGGTGGTCTGCTCGGGCCGCCAGGTGACGTGGTCGGTTCGCCGGGTGGTG TACTCGGGCTGGCGGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MMTFIGYLFLAPLSAAFFGFLVWLLPAIAMRDVIGRMRIRPFTFFVTGYIFIGLMSFYLLVFYEDHEVAPFLGTVASLGL VWAVRRWWRSRRGSRTVAGFNRLTGPRQRSGAPASGPGIPHPGQWGVQPGQHGVQPGQYGVQPGQWGVQPGQYGAQPGPH RTHPGQWGVQPGPHGVQPGEHPGPYGGPGYPGVPGQTTPPGYPAPPGQGGHPGHPGAAATGGPPGSVGQSPADGVQPGGP GWTPGQDGEHLDTAGAGEPPAPGRTGRIAGYPLAAPPPDSPSGPPGYPPPERPAPGGPAAPTPEASGGPVPSPPAPGSSV PGSQVPGSPMSGGPASSGPVPGGPVPGGPPGPPSGRPASGGPEPDGPVSGAGGPVSGGPGAGPPAWSDEPDIDPTWLEFF ASEPGGLGTDGPGAGGPGGGAGPAGPAGPAGATGRGGPGGPVDSAGSVDPEEPDGPTSGPPDDRRP
Sequences:
>Translated_466_residues MMTFIGYLFLAPLSAAFFGFLVWLLPAIAMRDVIGRMRIRPFTFFVTGYIFIGLMSFYLLVFYEDHEVAPFLGTVASLGL VWAVRRWWRSRRGSRTVAGFNRLTGPRQRSGAPASGPGIPHPGQWGVQPGQHGVQPGQYGVQPGQWGVQPGQYGAQPGPH RTHPGQWGVQPGPHGVQPGEHPGPYGGPGYPGVPGQTTPPGYPAPPGQGGHPGHPGAAATGGPPGSVGQSPADGVQPGGP GWTPGQDGEHLDTAGAGEPPAPGRTGRIAGYPLAAPPPDSPSGPPGYPPPERPAPGGPAAPTPEASGGPVPSPPAPGSSV PGSQVPGSPMSGGPASSGPVPGGPVPGGPPGPPSGRPASGGPEPDGPVSGAGGPVSGGPGAGPPAWSDEPDIDPTWLEFF ASEPGGLGTDGPGAGGPGGGAGPAGPAGPAGATGRGGPGGPVDSAGSVDPEEPDGPTSGPPDDRRP >Mature_466_residues MMTFIGYLFLAPLSAAFFGFLVWLLPAIAMRDVIGRMRIRPFTFFVTGYIFIGLMSFYLLVFYEDHEVAPFLGTVASLGL VWAVRRWWRSRRGSRTVAGFNRLTGPRQRSGAPASGPGIPHPGQWGVQPGQHGVQPGQYGVQPGQWGVQPGQYGAQPGPH RTHPGQWGVQPGPHGVQPGEHPGPYGGPGYPGVPGQTTPPGYPAPPGQGGHPGHPGAAATGGPPGSVGQSPADGVQPGGP GWTPGQDGEHLDTAGAGEPPAPGRTGRIAGYPLAAPPPDSPSGPPGYPPPERPAPGGPAAPTPEASGGPVPSPPAPGSSV PGSQVPGSPMSGGPASSGPVPGGPVPGGPPGPPSGRPASGGPEPDGPVSGAGGPVSGGPGAGPPAWSDEPDIDPTWLEFF ASEPGGLGTDGPGAGGPGGGAGPAGPAGPAGATGRGGPGGPVDSAGSVDPEEPDGPTSGPPDDRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45767; Mature: 45767
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTFIGYLFLAPLSAAFFGFLVWLLPAIAMRDVIGRMRIRPFTFFVTGYIFIGLMSFYLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VFYEDHEVAPFLGTVASLGLVWAVRRWWRSRRGSRTVAGFNRLTGPRQRSGAPASGPGIP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCC HPGQWGVQPGQHGVQPGQYGVQPGQWGVQPGQYGAQPGPHRTHPGQWGVQPGPHGVQPGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPGPYGGPGYPGVPGQTTPPGYPAPPGQGGHPGHPGAAATGGPPGSVGQSPADGVQPGGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWTPGQDGEHLDTAGAGEPPAPGRTGRIAGYPLAAPPPDSPSGPPGYPPPERPAPGGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPEASGGPVPSPPAPGSSVPGSQVPGSPMSGGPASSGPVPGGPVPGGPPGPPSGRPASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPEPDGPVSGAGGPVSGGPGAGPPAWSDEPDIDPTWLEFFASEPGGLGTDGPGAGGPGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC AGPAGPAGPAGATGRGGPGGPVDSAGSVDPEEPDGPTSGPPDDRRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMTFIGYLFLAPLSAAFFGFLVWLLPAIAMRDVIGRMRIRPFTFFVTGYIFIGLMSFYLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VFYEDHEVAPFLGTVASLGLVWAVRRWWRSRRGSRTVAGFNRLTGPRQRSGAPASGPGIP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCC HPGQWGVQPGQHGVQPGQYGVQPGQWGVQPGQYGAQPGPHRTHPGQWGVQPGPHGVQPGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPGPYGGPGYPGVPGQTTPPGYPAPPGQGGHPGHPGAAATGGPPGSVGQSPADGVQPGGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWTPGQDGEHLDTAGAGEPPAPGRTGRIAGYPLAAPPPDSPSGPPGYPPPERPAPGGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPEASGGPVPSPPAPGSSVPGSQVPGSPMSGGPASSGPVPGGPVPGGPPGPPSGRPASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPEPDGPVSGAGGPVSGGPGAGPPAWSDEPDIDPTWLEFFASEPGGLGTDGPGAGGPGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC AGPAGPAGPAGATGRGGPGGPVDSAGSVDPEEPDGPTSGPPDDRRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA