| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319020
Identifier: 158319020
GI number: 158319020
Start: 8924909
End: 8926108
Strand: Direct
Name: 158319020
Synonym: Franean1_7303
Alternate gene names: NA
Gene position: 8924909-8926108 (Clockwise)
Preceding gene: 158319019
Following gene: 158319034
Centisome position: 99.36
GC content: 73.25
Gene sequence:
>1200_bases ATGACATCGAGGACACCGGCTACCGCCCCGGAGACGATTCCCGTGCCCGGCAGGCAGCCGCATCCCGCCACGGCCACCGA CGGGTCCGACCCGTCGGGCGGGCCCGACAAACCCGCCCGAACGGACCAGACCCCGCAGATCACCGTGGACCGCCACCTCA CCGCCGCCGAACGGCACGCCTCGCTCGCCGCGGACATGCGCGCCGGCCTGACCTCCCACCCTCGTGAGCTGCCACCCAAG TGGTTCTACGACGCCACCGGCAGCCTGCTGTTCGACCGGATCACCCGCCTGCCCGAGTACTACCCGACCCGCCGCGAGCA CGCGGTGCTCACCGCGCACGCCGCCGAGATCGCCGCCGTCTGCCCGGCCGGCACCCTCATCGAGCTCGGCTCCGGCACCT CGGAGAAGACCCGCCTGCTCCTCGACGCGCTGCGCGCCACCGGGGTGCTACGCCGCTTCGTCCCCTTCGACGTGGACGAG GAGACCCTGCTCCAGGCCGGACAGGACATCCTGCGGGCGTATCCGGGAATCTCGGTGCACGCGGTGGTCGGGGATTTCGA GCGCCACCTCGGCCTTCTCCCCGGCGCCCGGCCCGCCGCGGACACGGGCGCGGCGGCGGGCGCCGGTGCTGCCGGCGCTG ATGGCGGCGCTGCCGGTGTTGATGGCGGCCACGGTGGAGGCCGCGACGACCGGCGGCTTGTGGCCTTCCTCGGCGGAACC ATCGGCAACCTGCGGCCCGCGGCGCGCGCCGCCTTCCTGCGCGCCCTGAGCAACCAGTTCACCGACGGCGACGCCCTGCT CCTCGGCGCCGACCTGGTGAAGGACCCGCGACGCCTCGTCGCGGCCTACGACGACAGCGCCGGCGTGACAGCCGCCTTCA ACCGCAACGTTCTCTCAGTGATCAACCGGGAGCTGGGGGCCGACTTCGACCTGCGCGGGTTCGCCCACGTCGCCGCCTGG GACGCGGAGAACTCCTGGATCGAGATGCGCCTGCGCAGCGTCCGCGAGCAGGAGGTCGGGGTCCGCGCCCTGGACCTGGT CGCCCGCTTCGACGCCGACGAGCAGATGCGCACCGAGATCAGCGCCAAGTTCACCCTCGACGCGATCGCCGCCGAGCTGG CCGCGGCCGGACTCTCCGTCAGCCACCAGTGGACGGACCCAGACGGCGACTTCGCCCTGACCCTGGCCGTCCCCTCCTGA
Upstream 100 bases:
>100_bases CAATATCTCCTGGTGGCCGACACACACAAAGTTACTCTTAGTAGTTTGATCTCTTAGAACGACTACGGTGAGTCGTACGA GGCAGACGGAGGGCACCACG
Downstream 100 bases:
>100_bases TCCGACCGGGCCGACCGGGCCGGGGCGCGGCGGCCGGAGCCTGCGCGGTGGCATCAGGGCGGCTGGGGTGCCAGGGCAGT CGGAGTATCACGGCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: S-Adenosyl-L-Methionine-Dependentmethyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Methyltransferase Type; Conserved Protein; Conserved Domain Protein
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTSRTPATAPETIPVPGRQPHPATATDGSDPSGGPDKPARTDQTPQITVDRHLTAAERHASLAADMRAGLTSHPRELPPK WFYDATGSLLFDRITRLPEYYPTRREHAVLTAHAAEIAAVCPAGTLIELGSGTSEKTRLLLDALRATGVLRRFVPFDVDE ETLLQAGQDILRAYPGISVHAVVGDFERHLGLLPGARPAADTGAAAGAGAAGADGGAAGVDGGHGGGRDDRRLVAFLGGT IGNLRPAARAAFLRALSNQFTDGDALLLGADLVKDPRRLVAAYDDSAGVTAAFNRNVLSVINRELGADFDLRGFAHVAAW DAENSWIEMRLRSVREQEVGVRALDLVARFDADEQMRTEISAKFTLDAIAAELAAAGLSVSHQWTDPDGDFALTLAVPS
Sequences:
>Translated_399_residues MTSRTPATAPETIPVPGRQPHPATATDGSDPSGGPDKPARTDQTPQITVDRHLTAAERHASLAADMRAGLTSHPRELPPK WFYDATGSLLFDRITRLPEYYPTRREHAVLTAHAAEIAAVCPAGTLIELGSGTSEKTRLLLDALRATGVLRRFVPFDVDE ETLLQAGQDILRAYPGISVHAVVGDFERHLGLLPGARPAADTGAAAGAGAAGADGGAAGVDGGHGGGRDDRRLVAFLGGT IGNLRPAARAAFLRALSNQFTDGDALLLGADLVKDPRRLVAAYDDSAGVTAAFNRNVLSVINRELGADFDLRGFAHVAAW DAENSWIEMRLRSVREQEVGVRALDLVARFDADEQMRTEISAKFTLDAIAAELAAAGLSVSHQWTDPDGDFALTLAVPS >Mature_398_residues TSRTPATAPETIPVPGRQPHPATATDGSDPSGGPDKPARTDQTPQITVDRHLTAAERHASLAADMRAGLTSHPRELPPKW FYDATGSLLFDRITRLPEYYPTRREHAVLTAHAAEIAAVCPAGTLIELGSGTSEKTRLLLDALRATGVLRRFVPFDVDEE TLLQAGQDILRAYPGISVHAVVGDFERHLGLLPGARPAADTGAAAGAGAAGADGGAAGVDGGHGGGRDDRRLVAFLGGTI GNLRPAARAAFLRALSNQFTDGDALLLGADLVKDPRRLVAAYDDSAGVTAAFNRNVLSVINRELGADFDLRGFAHVAAWD AENSWIEMRLRSVREQEVGVRALDLVARFDADEQMRTEISAKFTLDAIAAELAAAGLSVSHQWTDPDGDFALTLAVPS
Specific function: Unknown
COG id: COG4301
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42166; Mature: 42034
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRTPATAPETIPVPGRQPHPATATDGSDPSGGPDKPARTDQTPQITVDRHLTAAERHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH SLAADMRAGLTSHPRELPPKWFYDATGSLLFDRITRLPEYYPTRREHAVLTAHAAEIAAV HHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHCHHHCCCCCCCEEEEEHHHHHHHH CPAGTLIELGSGTSEKTRLLLDALRATGVLRRFVPFDVDEETLLQAGQDILRAYPGISVH CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEE AVVGDFERHLGLLPGARPAADTGAAAGAGAAGADGGAAGVDGGHGGGRDDRRLVAFLGGT EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHEECCCC IGNLRPAARAAFLRALSNQFTDGDALLLGADLVKDPRRLVAAYDDSAGVTAAFNRNVLSV CCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCHHHEEEECCCCCEEEHHCCHHHHH INRELGADFDLRGFAHVAAWDAENSWIEMRLRSVREQEVGVRALDLVARFDADEQMRTEI HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHH SAKFTLDAIAAELAAAGLSVSHQWTDPDGDFALTLAVPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TSRTPATAPETIPVPGRQPHPATATDGSDPSGGPDKPARTDQTPQITVDRHLTAAERHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH SLAADMRAGLTSHPRELPPKWFYDATGSLLFDRITRLPEYYPTRREHAVLTAHAAEIAAV HHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHCHHHCCCCCCCEEEEEHHHHHHHH CPAGTLIELGSGTSEKTRLLLDALRATGVLRRFVPFDVDEETLLQAGQDILRAYPGISVH CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEE AVVGDFERHLGLLPGARPAADTGAAAGAGAAGADGGAAGVDGGHGGGRDDRRLVAFLGGT EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHEECCCC IGNLRPAARAAFLRALSNQFTDGDALLLGADLVKDPRRLVAAYDDSAGVTAAFNRNVLSV CCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCHHHEEEECCCCCEEEHHCCHHHHH INRELGADFDLRGFAHVAAWDAENSWIEMRLRSVREQEVGVRALDLVARFDADEQMRTEI HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHH SAKFTLDAIAAELAAAGLSVSHQWTDPDGDFALTLAVPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA