| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319019
Identifier: 158319019
GI number: 158319019
Start: 8924122
End: 8924865
Strand: Direct
Name: 158319019
Synonym: Franean1_7302
Alternate gene names: NA
Gene position: 8924122-8924865 (Clockwise)
Preceding gene: 158319018
Following gene: 158319020
Centisome position: 99.36
GC content: 72.58
Gene sequence:
>744_bases GTGTGCCGTCACCTGGCCTGGCTCGGTGCCCCGCGCACGCTCGCGGCGCTGACCCTCGACCGGCCGTCCAGCCTGCTGCG CCAGTCGTGGGCGCCCCGCCGGATGCGGCACGGGACCGTCAACGCCGACGGCTTCGGTGTCGGCTGGTACGCGCCCGGCC TGCGCCCCGAACCCGCCCGCTACCGGCGCGCGGTGCCGATGTGGACGGACGCCTCCTACAGCTCGTTCGCCGGCGCCGTG ACCTCGGGATGTGTGCTTGCCGCGGTGCGCAGCGCCACCGTCGGGATGCCCGTCGAGGAGACCGCGACCGCCCCCTTCAC CGAAGGCCGGCTGCTGCTGAGCCACAACGGGCGGGTGCCCGCCGACGGCGCGCTGCGGGAGCTGGCGGCCCGGCCCGGCG CGCCGGTGCCGGACTCCCGCTGCGACTCGGCCATCGTGGCCGCCCTGCTGTGGGAGAGCGCGTCCCGGTTGCCACTGCCG CGGGCCGTGGCGGACGTCGTCCTGACGCTGGGCGGGCTGCGCGAGCCGGACGGGACGCCGTCCCGGCTGAACCTGCTGGT GACCGACGGCACGCAGCTCGTGGCGAGCACCTGGCGGGACACCCTCAGCTACCGCGAGGAGGTGGACGGGATCGTCGTCG CCAGTGAGCCAGATGATGACGAATCCGATTGGGTCGACGTACCGGACCAATATCTCCTGGTGGCCGACACACACAAAGTT ACTCTTAGTAGTTTGATCTCTTAG
Upstream 100 bases:
>100_bases CCCCACCTGTGCCCGTGGCCTGGCGCCGCGACGGCGGCGGGACGGTGGGCTGCCGGGGGCGCGGTGCCAAGGCCCGCGCG CAGAAAGGTCACGCCTGCCC
Downstream 100 bases:
>100_bases AACGACTACGGTGAGTCGTACGAGGCAGACGGAGGGCACCACGATGACATCGAGGACACCGGCTACCGCCCCGGAGACGA TTCCCGTGCCCGGCAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MCRHLAWLGAPRTLAALTLDRPSSLLRQSWAPRRMRHGTVNADGFGVGWYAPGLRPEPARYRRAVPMWTDASYSSFAGAV TSGCVLAAVRSATVGMPVEETATAPFTEGRLLLSHNGRVPADGALRELAARPGAPVPDSRCDSAIVAALLWESASRLPLP RAVADVVLTLGGLREPDGTPSRLNLLVTDGTQLVASTWRDTLSYREEVDGIVVASEPDDDESDWVDVPDQYLLVADTHKV TLSSLIS
Sequences:
>Translated_247_residues MCRHLAWLGAPRTLAALTLDRPSSLLRQSWAPRRMRHGTVNADGFGVGWYAPGLRPEPARYRRAVPMWTDASYSSFAGAV TSGCVLAAVRSATVGMPVEETATAPFTEGRLLLSHNGRVPADGALRELAARPGAPVPDSRCDSAIVAALLWESASRLPLP RAVADVVLTLGGLREPDGTPSRLNLLVTDGTQLVASTWRDTLSYREEVDGIVVASEPDDDESDWVDVPDQYLLVADTHKV TLSSLIS >Mature_247_residues MCRHLAWLGAPRTLAALTLDRPSSLLRQSWAPRRMRHGTVNADGFGVGWYAPGLRPEPARYRRAVPMWTDASYSSFAGAV TSGCVLAAVRSATVGMPVEETATAPFTEGRLLLSHNGRVPADGALRELAARPGAPVPDSRCDSAIVAALLWESASRLPLP RAVADVVLTLGGLREPDGTPSRLNLLVTDGTQLVASTWRDTLSYREEVDGIVVASEPDDDESDWVDVPDQYLLVADTHKV TLSSLIS
Specific function: Unknown
COG id: COG0121
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017808 - InterPro: IPR017932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26538; Mature: 26538
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRHLAWLGAPRTLAALTLDRPSSLLRQSWAPRRMRHGTVNADGFGVGWYAPGLRPEPAR CCCCCHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHCCCCCCCCCEECEECCCCCCCHHH YRRAVPMWTDASYSSFAGAVTSGCVLAAVRSATVGMPVEETATAPFTEGRLLLSHNGRVP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCCC ADGALRELAARPGAPVPDSRCDSAIVAALLWESASRLPLPRAVADVVLTLGGLREPDGTP CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC SRLNLLVTDGTQLVASTWRDTLSYREEVDGIVVASEPDDDESDWVDVPDQYLLVADTHKV CEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCHH TLSSLIS HHHHHCC >Mature Secondary Structure MCRHLAWLGAPRTLAALTLDRPSSLLRQSWAPRRMRHGTVNADGFGVGWYAPGLRPEPAR CCCCCHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHCCCCCCCCCEECEECCCCCCCHHH YRRAVPMWTDASYSSFAGAVTSGCVLAAVRSATVGMPVEETATAPFTEGRLLLSHNGRVP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECCCCCC ADGALRELAARPGAPVPDSRCDSAIVAALLWESASRLPLPRAVADVVLTLGGLREPDGTP CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC SRLNLLVTDGTQLVASTWRDTLSYREEVDGIVVASEPDDDESDWVDVPDQYLLVADTHKV CEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCHH TLSSLIS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]