| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pgi [H]
Identifier: 158319003
GI number: 158319003
Start: 8898114
End: 8899826
Strand: Reverse
Name: pgi [H]
Synonym: Franean1_7286
Alternate gene names: 158319003
Gene position: 8899826-8898114 (Counterclockwise)
Preceding gene: 158319007
Following gene: 158319002
Centisome position: 99.08
GC content: 69.53
Gene sequence:
>1713_bases GTGGGCGCGCGGACGGCGCGGCACACGACAGCACTCCTCCGAGGAAGGGCCTCCAACGCCATGGCGAACACCGAGTCCAC CGCCCTCGCCGCTGGAACGGTCGTCGACCGGACCCCGGAATGGGCCGCGCTGGCCGCGCACCACGCGGAGATCTCCGGGG TGACCCTGCGGAAGCTCTTCGCCGATGATCCGGGCCGCGCCGATTCGTTCACCGTCGAGGCGGACGGCCTTCGGCTCGAC TACTCCAAGAACATCGTCACGGCCCGGACGGTCGAACTGCTGCTCGCGCTGGCGCGTCGCGCCGGCCTCGGCGCGCGCAT CGAGGCGATGTTCGGCGGCGAGCGCATCAACGTCACCGAGAACCGGCCGGTGCTGCACGTGGCGCTGCGCACGCCGCTCG GAACCAGCATCCACGTGGACGGCGTCGACGTGGTGCCGGAGGTGCACGCCGTGCTCGACCGGATGTCGGCGTTCTGCGAC CGGGTCCGCTCCGGGGTGTGGACGGGGGCGACCGGCGAGCACATCACGACCGTCGTCAACATCGGCATCGGCGGCTCCGA CCTGGGGCCCGCGATGGCCTACCAGGCGCTGCGGGACTACTCCGACCGCTCGATCGCCGTCCGGTTCGTCTCGAACGTCG ACCCGACGGACATCTGGGAAGCCACCCACGACCTCGATCCGGCCAGGACGCTCTTCATCGTCGCGTCGAAGACGTTCACC ACGCTGGAGACGCTCGCGAACGCCCGCGCCGCGCGGGCCTGGCTCACCGCCGCGCTCGGCCAGGACGCCGTCGCGCACCA TTTCGTTGCCGTGTCAACGAATGCGGAGAAGGTGGCCGAGTTCGGCATCGACACGGCCAACATGTTCGAGTTCTGGGACT GGGTGGGCGGCCGGTACTCGATGGACTCCGCCATCGGTCTCGCTCTGATGGTCGCGATCGGCCCGCACCACTTCCGGGAG ATGCTGGCCGGATTCCACGCGATGGATGTTCATTTCCGGAACACCCCGTTCGAGCGGAACCTGCCGGTTCTGCTCGGCGT GCTCGGGCTGTGGTACCGGGACTTCTTCGGCGCCCAGAGCCACGCCGTGCTCCCCTACAGCCAGTACCTGGACCGCTTCC CGGCGTACCTGCAGCAGCTGGACATGGAGAGTAACGGCAAGTCAGTTGATCTGGCCGGCCGGCCCGTACCGGTGCCGACC GGCCCGGTGGTGTGGGGCACCCCGGGAACCAACGGTCAGCACGCCTACTTCCAGCTCCTGCACCAGGGGACGACGGTCGT CCCGGCCGACTTCATCGGCTTCCTCGCGCCCAACCACCCAGGTGTCGGCGACGTCGACCAGCACGTCCTGCTGATGGCCA ACTTCTTCGCTCAGACGGAGGCCCTCGCCTTCGGCAGGACGGCGGAGGAGGTCGCGGCCGAGGGGGTGGACGCCGCCCTC GTCCCGCACCGGACGTTCGCCGGAAACCGTCCGACGAACACCCTGCTGGCGCCGAAGCTGACGCCCTTCGCCCTGGGCCA GCTGGTCGCCCTCTACGAGCACAAGGTGTTCACGCAGGGCGTCGTGTGGGGGGTGAACAGCTACGACCAGTGGGGCGTGG AGCTGGGCAAGGTGCTGGCCGGACGGATCATCCCCGAGCTGGCCGACCCGTCGGCGCCCCCGCGGCACGACAGCTCCACC AACGCGCTGATCAACCTGTTCCGGTCGGTCTGA
Upstream 100 bases:
>100_bases ACGGCCTGTTCCCCCACATTCCGCCCCTCGCAGGGACCCGACGGGCGCGTCAGATGCGCGACTGCACCATGCTGGTCGTC GTCGACAGGTGTTCGGCCGT
Downstream 100 bases:
>100_bases GCCGCGACCGCCCGGTCCAGTCCGGTTACGGGCTGGGCTGGGCTGGGCGTCGTCAATTAGTCATCGAGGTTTAACGATTC CTTGATCTATGTTACTCTCT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MGARTARHTTALLRGRASNAMANTESTALAAGTVVDRTPEWAALAAHHAEISGVTLRKLFADDPGRADSFTVEADGLRLD YSKNIVTARTVELLLALARRAGLGARIEAMFGGERINVTENRPVLHVALRTPLGTSIHVDGVDVVPEVHAVLDRMSAFCD RVRSGVWTGATGEHITTVVNIGIGGSDLGPAMAYQALRDYSDRSIAVRFVSNVDPTDIWEATHDLDPARTLFIVASKTFT TLETLANARAARAWLTAALGQDAVAHHFVAVSTNAEKVAEFGIDTANMFEFWDWVGGRYSMDSAIGLALMVAIGPHHFRE MLAGFHAMDVHFRNTPFERNLPVLLGVLGLWYRDFFGAQSHAVLPYSQYLDRFPAYLQQLDMESNGKSVDLAGRPVPVPT GPVVWGTPGTNGQHAYFQLLHQGTTVVPADFIGFLAPNHPGVGDVDQHVLLMANFFAQTEALAFGRTAEEVAAEGVDAAL VPHRTFAGNRPTNTLLAPKLTPFALGQLVALYEHKVFTQGVVWGVNSYDQWGVELGKVLAGRIIPELADPSAPPRHDSST NALINLFRSV
Sequences:
>Translated_570_residues MGARTARHTTALLRGRASNAMANTESTALAAGTVVDRTPEWAALAAHHAEISGVTLRKLFADDPGRADSFTVEADGLRLD YSKNIVTARTVELLLALARRAGLGARIEAMFGGERINVTENRPVLHVALRTPLGTSIHVDGVDVVPEVHAVLDRMSAFCD RVRSGVWTGATGEHITTVVNIGIGGSDLGPAMAYQALRDYSDRSIAVRFVSNVDPTDIWEATHDLDPARTLFIVASKTFT TLETLANARAARAWLTAALGQDAVAHHFVAVSTNAEKVAEFGIDTANMFEFWDWVGGRYSMDSAIGLALMVAIGPHHFRE MLAGFHAMDVHFRNTPFERNLPVLLGVLGLWYRDFFGAQSHAVLPYSQYLDRFPAYLQQLDMESNGKSVDLAGRPVPVPT GPVVWGTPGTNGQHAYFQLLHQGTTVVPADFIGFLAPNHPGVGDVDQHVLLMANFFAQTEALAFGRTAEEVAAEGVDAAL VPHRTFAGNRPTNTLLAPKLTPFALGQLVALYEHKVFTQGVVWGVNSYDQWGVELGKVLAGRIIPELADPSAPPRHDSST NALINLFRSV >Mature_569_residues GARTARHTTALLRGRASNAMANTESTALAAGTVVDRTPEWAALAAHHAEISGVTLRKLFADDPGRADSFTVEADGLRLDY SKNIVTARTVELLLALARRAGLGARIEAMFGGERINVTENRPVLHVALRTPLGTSIHVDGVDVVPEVHAVLDRMSAFCDR VRSGVWTGATGEHITTVVNIGIGGSDLGPAMAYQALRDYSDRSIAVRFVSNVDPTDIWEATHDLDPARTLFIVASKTFTT LETLANARAARAWLTAALGQDAVAHHFVAVSTNAEKVAEFGIDTANMFEFWDWVGGRYSMDSAIGLALMVAIGPHHFREM LAGFHAMDVHFRNTPFERNLPVLLGVLGLWYRDFFGAQSHAVLPYSQYLDRFPAYLQQLDMESNGKSVDLAGRPVPVPTG PVVWGTPGTNGQHAYFQLLHQGTTVVPADFIGFLAPNHPGVGDVDQHVLLMANFFAQTEALAFGRTAEEVAAEGVDAALV PHRTFAGNRPTNTLLAPKLTPFALGQLVALYEHKVFTQGVVWGVNSYDQWGVELGKVLAGRIIPELADPSAPPRHDSSTN ALINLFRSV
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=547, Percent_Identity=52.8336380255942, Blast_Score=574, Evalue=1e-164, Organism=Homo sapiens, GI296080693, Length=559, Percent_Identity=48.8372093023256, Blast_Score=518, Evalue=1e-147, Organism=Escherichia coli, GI1790457, Length=543, Percent_Identity=55.4327808471455, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71996703, Length=527, Percent_Identity=52.1821631878558, Blast_Score=542, Evalue=1e-154, Organism=Caenorhabditis elegans, GI71996708, Length=527, Percent_Identity=52.1821631878558, Blast_Score=542, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6319673, Length=556, Percent_Identity=48.9208633093525, Blast_Score=531, Evalue=1e-152, Organism=Drosophila melanogaster, GI24651916, Length=530, Percent_Identity=51.8867924528302, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI24651914, Length=530, Percent_Identity=51.8867924528302, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI17737445, Length=530, Percent_Identity=51.8867924528302, Blast_Score=551, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 61619; Mature: 61487
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARTARHTTALLRGRASNAMANTESTALAAGTVVDRTPEWAALAAHHAEISGVTLRKLF CCCCHHHHHHHHHHCCCCCCCCCCCCHHEEECCHHCCCCCHHHHHHHHHHCCCHHHHHHH ADDPGRADSFTVEADGLRLDYSKNIVTARTVELLLALARRAGLGARIEAMFGGERINVTE CCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEC NRPVLHVALRTPLGTSIHVDGVDVVPEVHAVLDRMSAFCDRVRSGVWTGATGEHITTVVN CCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE IGIGGSDLGPAMAYQALRDYSDRSIAVRFVSNVDPTDIWEATHDLDPARTLFIVASKTFT ECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCHHH TLETLANARAARAWLTAALGQDAVAHHFVAVSTNAEKVAEFGIDTANMFEFWDWVGGRYS HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCC MDSAIGLALMVAIGPHHFREMLAGFHAMDVHFRNTPFERNLPVLLGVLGLWYRDFFGAQS CHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC HAVLPYSQYLDRFPAYLQQLDMESNGKSVDLAGRPVPVPTGPVVWGTPGTNGQHAYFQLL CEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH HQGTTVVPADFIGFLAPNHPGVGDVDQHVLLMANFFAQTEALAFGRTAEEVAAEGVDAAL HCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEE VPHRTFAGNRPTNTLLAPKLTPFALGQLVALYEHKVFTQGVVWGVNSYDQWGVELGKVLA CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHH GRIIPELADPSAPPRHDSSTNALINLFRSV HHHHHHHCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GARTARHTTALLRGRASNAMANTESTALAAGTVVDRTPEWAALAAHHAEISGVTLRKLF CCCHHHHHHHHHHCCCCCCCCCCCCHHEEECCHHCCCCCHHHHHHHHHHCCCHHHHHHH ADDPGRADSFTVEADGLRLDYSKNIVTARTVELLLALARRAGLGARIEAMFGGERINVTE CCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEC NRPVLHVALRTPLGTSIHVDGVDVVPEVHAVLDRMSAFCDRVRSGVWTGATGEHITTVVN CCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE IGIGGSDLGPAMAYQALRDYSDRSIAVRFVSNVDPTDIWEATHDLDPARTLFIVASKTFT ECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCHHH TLETLANARAARAWLTAALGQDAVAHHFVAVSTNAEKVAEFGIDTANMFEFWDWVGGRYS HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCC MDSAIGLALMVAIGPHHFREMLAGFHAMDVHFRNTPFERNLPVLLGVLGLWYRDFFGAQS CHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC HAVLPYSQYLDRFPAYLQQLDMESNGKSVDLAGRPVPVPTGPVVWGTPGTNGQHAYFQLL CEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH HQGTTVVPADFIGFLAPNHPGVGDVDQHVLLMANFFAQTEALAFGRTAEEVAAEGVDAAL HCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEE VPHRTFAGNRPTNTLLAPKLTPFALGQLVALYEHKVFTQGVVWGVNSYDQWGVELGKVLA CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHH GRIIPELADPSAPPRHDSSTNALINLFRSV HHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA