Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158319002

Identifier: 158319002

GI number: 158319002

Start: 8897605

End: 8897952

Strand: Reverse

Name: 158319002

Synonym: Franean1_7285

Alternate gene names: NA

Gene position: 8897952-8897605 (Counterclockwise)

Preceding gene: 158319003

Following gene: 158319001

Centisome position: 99.06

GC content: 73.56

Gene sequence:

>348_bases
ATGCGGGTCGACGCGACAGCCACGCGGATGACGGTGCGGCGGACCGGGGACGACGTCGTGATCGAGCTCGGGGGTGAGTT
CGACATGGTCGGCAGGCTACGTTTCCGCGAGCAGGTCGGCGAGCTGCTGGGCCGGGGCGGCGGAGTGGTGACGGTGGATG
TGGCCGAACTTCGGGCGATCGACATCGCGGGTCTCGCCGCCCTGCTCCGGGCGGATCTCCTGCTTCGTCGCGTCCACGCC
GAGCTGCGTATTCGCGCGGCCGCGCCGGCGTTCGCCGAGCTCGTCCGCGAGACCGGGCTCGCCGGCCGGCTTCGCGTCGA
GGAGGCCGGCCGCCGCCGCGGCCACTGA

Upstream 100 bases:

>100_bases
CATCGAGGTTTAACGATTCCTTGATCTATGTTACTCTCTGTAATTAACTCACGGGGCGGTGCCCGTGCTGCGACGGATGG
AGATCCCGGGGGGCGCACGC

Downstream 100 bases:

>100_bases
ACCGCCGTCCGATGAGCGGCCGTCGAAGCCTTCGTTCAAGCCGCCGTGCAGGCCGCTGTTCGGGCCGTCGCCGCCGCCCG
GCGTGATCCCCGCCGCCAGC

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Sigma-Factor Antagonist; Anti-Sigma-B Factor Antagonist

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRVDATATRMTVRRTGDDVVIELGGEFDMVGRLRFREQVGELLGRGGGVVTVDVAELRAIDIAGLAALLRADLLLRRVHA
ELRIRAAAPAFAELVRETGLAGRLRVEEAGRRRGH

Sequences:

>Translated_115_residues
MRVDATATRMTVRRTGDDVVIELGGEFDMVGRLRFREQVGELLGRGGGVVTVDVAELRAIDIAGLAALLRADLLLRRVHA
ELRIRAAAPAFAELVRETGLAGRLRVEEAGRRRGH
>Mature_115_residues
MRVDATATRMTVRRTGDDVVIELGGEFDMVGRLRFREQVGELLGRGGGVVTVDVAELRAIDIAGLAALLRADLLLRRVHA
ELRIRAAAPAFAELVRETGLAGRLRVEEAGRRRGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12555; Mature: 12555

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDATATRMTVRRTGDDVVIELGGEFDMVGRLRFREQVGELLGRGGGVVTVDVAELRAI
CCCCCHHHHEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
DIAGLAALLRADLLLRRVHAELRIRAAAPAFAELVRETGLAGRLRVEEAGRRRGH
HHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCEEEHHHHHCCCCC
>Mature Secondary Structure
MRVDATATRMTVRRTGDDVVIELGGEFDMVGRLRFREQVGELLGRGGGVVTVDVAELRAI
CCCCCHHHHEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
DIAGLAALLRADLLLRRVHAELRIRAAAPAFAELVRETGLAGRLRVEEAGRRRGH
HHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA