| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319001
Identifier: 158319001
GI number: 158319001
Start: 8896823
End: 8897146
Strand: Reverse
Name: 158319001
Synonym: Franean1_7284
Alternate gene names: NA
Gene position: 8897146-8896823 (Counterclockwise)
Preceding gene: 158319002
Following gene: 158318997
Centisome position: 99.05
GC content: 72.53
Gene sequence:
>324_bases ATGTCTGTGCGACGCGCCGATCTCTCCGCCGGCGGGGGAGGTCCGACCGTCAGTACCGAGGACATGCGCGCCCGCCTCGC GATGGTCACCGAGCAGGTGGATTTCGCCCTGGCGGAGGTCGCGTTGCGCGGAGCGGCCTACCGGCGCGCGGCCCAGGACG CCGCCGACTGGCAGTGGCCGCCGGAGTCGCCGCAGAATCTGTCCAGGCCGGTCGTCGCCCGGGCGCTGTTGGCGCAGCTC ACGGCGGTCGCCCGGCTCCGTCTGTGGGCGCAGGAGCTCTACTGGCTGCAGGAACAGGTCCGGCTCAGGGCAATGGTGCC CTGA
Upstream 100 bases:
>100_bases ACCCGAGCCGGGTAATCACCCACCCGGTGCGTCAGGTCGCCAGAGTGTGGGCTATCCGGTGCTGTGCTCCCAGCCCAACT CCTCGTACCCTTCCTTCACC
Downstream 100 bases:
>100_bases GCCGGACCTGCTGGATCTGGCGCGCGCCCCGCGTCAGGCGGACGAGCAGTCGATGTTGGACGGCCCCGACGACGCCCCGC TGACCTGGTTGTCGCAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSVRRADLSAGGGGPTVSTEDMRARLAMVTEQVDFALAEVALRGAAYRRAAQDAADWQWPPESPQNLSRPVVARALLAQL TAVARLRLWAQELYWLQEQVRLRAMVP
Sequences:
>Translated_107_residues MSVRRADLSAGGGGPTVSTEDMRARLAMVTEQVDFALAEVALRGAAYRRAAQDAADWQWPPESPQNLSRPVVARALLAQL TAVARLRLWAQELYWLQEQVRLRAMVP >Mature_106_residues SVRRADLSAGGGGPTVSTEDMRARLAMVTEQVDFALAEVALRGAAYRRAAQDAADWQWPPESPQNLSRPVVARALLAQLT AVARLRLWAQELYWLQEQVRLRAMVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11873; Mature: 11742
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRRADLSAGGGGPTVSTEDMRARLAMVTEQVDFALAEVALRGAAYRRAAQDAADWQWP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PESPQNLSRPVVARALLAQLTAVARLRLWAQELYWLQEQVRLRAMVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVRRADLSAGGGGPTVSTEDMRARLAMVTEQVDFALAEVALRGAAYRRAAQDAADWQWP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PESPQNLSRPVVARALLAQLTAVARLRLWAQELYWLQEQVRLRAMVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA