| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 158318980
GI number: 158318980
Start: 8866064
End: 8866591
Strand: Direct
Name: fur [H]
Synonym: Franean1_7263
Alternate gene names: 158318980
Gene position: 8866064-8866591 (Clockwise)
Preceding gene: 158318977
Following gene: 158318984
Centisome position: 98.71
GC content: 74.24
Gene sequence:
>528_bases ATGTCAGCGGCCTCCGACCGGGCGGCAGGCGGCGCCGGCGCTGGCTCTGGTGACCGCCCGAACGGGGCGGTGTCCCGCCC GGGTCGCGGCCGCGGCACCTCCGTCCGGGCCACCCGGCAGGGCGACGCGGTCTCCTCCGCGCTCGCGGCGACGAACGCCT TCACCAGCGCGCAGGACCTGCACGCCCGCCTACGCCAGGAGGGCCAGTCCGTCGGCCTGACAACCGTCTACCGTCACCTG CAGGTGCTGGCCGACCGCGGCGAGGTGGACGTCCTGCGCCGGGATGACGGCGAGACCGTGTACCGGCGGTGCACCACGGA CGGTCACCACCACCATCTCGTGTGCCGCCACTGCGGCCACACGGTGGAGATCGCCGGCCCCGAGATCGAGGCCTGGACGT CCTCCGTGGCCAGCGCGGAGGGCTTCACCGACGTCGTACACACCGTCGAGATCTACGGAACGTGCGCACGGTGCGCCGCC TCACGCAACAGCGACAACAGCCCCGGCCGCCCTCGCGGCGGCGGCTGA
Upstream 100 bases:
>100_bases AGAACTGAGGAGATCGCGCGCCCTCCAGACGGGCCGGGTAGATGAGAGAGTGGATGTCGTGGCGAGTGTGGAAGGCGAGC GGGTGAGCTCCCCGCGCGGC
Downstream 100 bases:
>100_bases GCGAAACACGCGGAGACGAACGAGCGAACGCGCGAACGCGCGAAAACGGCTGAACGAACGCCCGCGAAAGCGGTTGGAGA AATGTAAAACGGCCGGGACA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSAASDRAAGGAGAGSGDRPNGAVSRPGRGRGTSVRATRQGDAVSSALAATNAFTSAQDLHARLRQEGQSVGLTTVYRHL QVLADRGEVDVLRRDDGETVYRRCTTDGHHHHLVCRHCGHTVEIAGPEIEAWTSSVASAEGFTDVVHTVEIYGTCARCAA SRNSDNSPGRPRGGG
Sequences:
>Translated_175_residues MSAASDRAAGGAGAGSGDRPNGAVSRPGRGRGTSVRATRQGDAVSSALAATNAFTSAQDLHARLRQEGQSVGLTTVYRHL QVLADRGEVDVLRRDDGETVYRRCTTDGHHHHLVCRHCGHTVEIAGPEIEAWTSSVASAEGFTDVVHTVEIYGTCARCAA SRNSDNSPGRPRGGG >Mature_174_residues SAASDRAAGGAGAGSGDRPNGAVSRPGRGRGTSVRATRQGDAVSSALAATNAFTSAQDLHARLRQEGQSVGLTTVYRHLQ VLADRGEVDVLRRDDGETVYRRCTTDGHHHHLVCRHCGHTVEIAGPEIEAWTSSVASAEGFTDVVHTVEIYGTCARCAAS RNSDNSPGRPRGGG
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18275; Mature: 18144
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASDRAAGGAGAGSGDRPNGAVSRPGRGRGTSVRATRQGDAVSSALAATNAFTSAQDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHH HARLRQEGQSVGLTTVYRHLQVLADRGEVDVLRRDDGETVYRRCTTDGHHHHLVCRHCGH HHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC TVEIAGPEIEAWTSSVASAEGFTDVVHTVEIYGTCARCAASRNSDNSPGRPRGGG EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAASDRAAGGAGAGSGDRPNGAVSRPGRGRGTSVRATRQGDAVSSALAATNAFTSAQDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHH HARLRQEGQSVGLTTVYRHLQVLADRGEVDVLRRDDGETVYRRCTTDGHHHHLVCRHCGH HHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC TVEIAGPEIEAWTSSVASAEGFTDVVHTVEIYGTCARCAASRNSDNSPGRPRGGG EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]