| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318977
Identifier: 158318977
GI number: 158318977
Start: 8862213
End: 8864369
Strand: Direct
Name: 158318977
Synonym: Franean1_7260
Alternate gene names: NA
Gene position: 8862213-8864369 (Clockwise)
Preceding gene: 158318976
Following gene: 158318980
Centisome position: 98.67
GC content: 75.71
Gene sequence:
>2157_bases GTGCTGGCCGAGCCGGCCGGTGGAACCGACCGGCCAGCCGGCCGAACCGCCCACGAGCTGGACATCCCGCCGATCCGGGG CGGCGGCGTGACCCGCGGCGACGGAGCGGTTCAGGCCGACTCGGCGGTCCAGGCCAGCGGGGCGGTTCAGGCCGTCGCGG TGATCAGCGGCGGCGTGGTGGGGCCTGCGCCGGACACACGTGAAACAACCGGGCCGCGAGGCGCGGTCGACATGCTGGCG GTGGTCGTAGTCAGCCTGCTGGCGGTCGCGGTCCAGGCGGTGCTGTGGGAACGCTTCCGCCAGCCGCTCTGGTACGACGA GCTGTGGCGCCCGCACTTCGTCGCCGAGCCGCCGGGGACCTTCTGGTCGGAGCTCTCGGTGGCGAACACGCCGTCCGCGA TCGGCTCGATGGGTCTGCTCCGGGTGTGCGGCGACGTGTTCGGGTGGCATGCCTGGGCCCTGCGGCTACCCTCCGCCGTT CCCCTCGTCGCGCTCGCCGCGGGCACCTGGCTACTGGCCCGCCGGCTGACCGGACGCACAGCGGCGTTCACGGCGGCACT GACGGTCACGCTCGGCGGCACCGTCGTGGACCTCGCGTCCCAGGTCAAGCCCTACACCCTCGACGCGGCCTGCGCGCTGG CCGTGGTCATGCTCTGGATGCGCGCCGCTTCCACCACCCGCGCGCTGCTGTGGAGCCGGTTCGCCGTCGGCGTCCTCGCA CTGTTCTCCCTACCCGCGGTCTTCCTCATCGTCCCGCTGACCGTCGTGGACGTCGCCCGGCCTCTGCACGGCGCCTATGG CTGGGCTGGCCGCCGCACGGCCGCCCGCCCAGCTGCTCGCAGGGCCTTCCGTCCACCTGCTCGCGCGGCCGTTCGCGCCG CGCTGTGCGACGCCCCCGCCGTCGTGATCGCGGGGCTGCACGCGGCGCTGTTCGTGTTGCACCAGTCCGGCCAACGGGCG AGCACGTTCTGGGACGACCACTTCCTGGCCGGGCGCGGACTGCCCGACGGGATCCGTTTCGTCGCCGACCAGCTCGCGGC GACCGCGGCCGGCGCGCCCCCGGGCATCGACCGCTATGACCCGAACCTGGTTCACCCGCTGACCGACTCGTCCGACCCGG CAGTGATCGTGCTTGGCTGTGCCGTCGCGATCACGTTCCTGGCCGGAGTGGTCACGCTCGCCCGGCGCCCGGATGGCCGG GTGCTGCTGGTCGCGACCGGCGGCGCCGAGCTGATGGTGCTGGCGGCGAGCGCCGGGCGGTACTGGCCGTTCGGCGCCGT GCGGACGAACGTCTTCCTCGTCCCGCTGCTCACCGTGGTCGCGGCCGCCGGAGCCGCCACGCTGGCCCGCACCGCCCGCG TCGCGTGGGCGGGAGCCGGGGTCGCCGGCCGCCCCGGGGACGGTCCTTCCGGTGGCGATCCCGCCGGTGGCCGCGCGGCC GGTGGCCGCACGGCCGGCTGGCAGCGCACAGCCGGCTGGCAGCGCACGGCGGCGGGCCTGCTGGCAGCGGTGACGGCGGT GACCGTCCTCGCCGCGGCCGCGGTGCCCGCCGCCGCGGTCAGCGCCCTGCACCCACTGTGGGAGGAACGCGGCGACCGCC GTCCGATCGACCTGATGGTGGACGCGACCGTCACCGCCCGCCGGCTCTACCGGCCCGGCGACCTGGTCGTCGTAGGCGGC CGGCTCGCCCGCGCGGGTTGGCTGTACGGGATGGAGGTAAGCCAGGACGGCGCCTCCGACGACCGGACACCCGGCCAGGA CGCAGCCGGCCAAAGTGCGGCTGGCCAGGACGCGCCCGCCGCGAACACAGCCGGTCAGGGCCCGACCCGTCAGGATGCGC CCGGTCAGGAACGTCCCGGCGGGCCGGGCGCGGATGTGGTGACCGGGCCGGTGGGACCGCGGGTGCCGCGCTCCTCGACC GTGTTCCTGACCGCGATCGGAGATGGCGGCGTCGGGCGGGCACTCACCCGGCGCGCCCCGGGCCCGGAGGGGCGGGTGCT GCTGTTCGTCCTCGCCTACGACCGCCGGGGCACGGGCCACTCGCTCGACGAGGCACGGGCCGCGGGCTGGTGCCCCGCCT GGACACACGACTTCGAGCTCACCGGCACGCTGCGCGTCCTCACCCCGTGCGGGCACCGAGCCGACAACGCAGGCTGA
Upstream 100 bases:
>100_bases CCTCGTCCGGATTTGCCGGGCGGCGCCGCACAGGCGATGTCCACAAGGGACGGGTGCTCTGTGGACAGAACCTGTGGACA ACCGGGTGGAGGACACGCGT
Downstream 100 bases:
>100_bases GCACACCCACCGGGCCCGGACCCGCGCGGCCGTGCCGCACGGCCTTCGGAGCCGGCACGGCCGCGCGGGTCCGCACGGCG GAGGTCTCACCCGGACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MLAEPAGGTDRPAGRTAHELDIPPIRGGGVTRGDGAVQADSAVQASGAVQAVAVISGGVVGPAPDTRETTGPRGAVDMLA VVVVSLLAVAVQAVLWERFRQPLWYDELWRPHFVAEPPGTFWSELSVANTPSAIGSMGLLRVCGDVFGWHAWALRLPSAV PLVALAAGTWLLARRLTGRTAAFTAALTVTLGGTVVDLASQVKPYTLDAACALAVVMLWMRAASTTRALLWSRFAVGVLA LFSLPAVFLIVPLTVVDVARPLHGAYGWAGRRTAARPAARRAFRPPARAAVRAALCDAPAVVIAGLHAALFVLHQSGQRA STFWDDHFLAGRGLPDGIRFVADQLAATAAGAPPGIDRYDPNLVHPLTDSSDPAVIVLGCAVAITFLAGVVTLARRPDGR VLLVATGGAELMVLAASAGRYWPFGAVRTNVFLVPLLTVVAAAGAATLARTARVAWAGAGVAGRPGDGPSGGDPAGGRAA GGRTAGWQRTAGWQRTAAGLLAAVTAVTVLAAAAVPAAAVSALHPLWEERGDRRPIDLMVDATVTARRLYRPGDLVVVGG RLARAGWLYGMEVSQDGASDDRTPGQDAAGQSAAGQDAPAANTAGQGPTRQDAPGQERPGGPGADVVTGPVGPRVPRSST VFLTAIGDGGVGRALTRRAPGPEGRVLLFVLAYDRRGTGHSLDEARAAGWCPAWTHDFELTGTLRVLTPCGHRADNAG
Sequences:
>Translated_718_residues MLAEPAGGTDRPAGRTAHELDIPPIRGGGVTRGDGAVQADSAVQASGAVQAVAVISGGVVGPAPDTRETTGPRGAVDMLA VVVVSLLAVAVQAVLWERFRQPLWYDELWRPHFVAEPPGTFWSELSVANTPSAIGSMGLLRVCGDVFGWHAWALRLPSAV PLVALAAGTWLLARRLTGRTAAFTAALTVTLGGTVVDLASQVKPYTLDAACALAVVMLWMRAASTTRALLWSRFAVGVLA LFSLPAVFLIVPLTVVDVARPLHGAYGWAGRRTAARPAARRAFRPPARAAVRAALCDAPAVVIAGLHAALFVLHQSGQRA STFWDDHFLAGRGLPDGIRFVADQLAATAAGAPPGIDRYDPNLVHPLTDSSDPAVIVLGCAVAITFLAGVVTLARRPDGR VLLVATGGAELMVLAASAGRYWPFGAVRTNVFLVPLLTVVAAAGAATLARTARVAWAGAGVAGRPGDGPSGGDPAGGRAA GGRTAGWQRTAGWQRTAAGLLAAVTAVTVLAAAAVPAAAVSALHPLWEERGDRRPIDLMVDATVTARRLYRPGDLVVVGG RLARAGWLYGMEVSQDGASDDRTPGQDAAGQSAAGQDAPAANTAGQGPTRQDAPGQERPGGPGADVVTGPVGPRVPRSST VFLTAIGDGGVGRALTRRAPGPEGRVLLFVLAYDRRGTGHSLDEARAAGWCPAWTHDFELTGTLRVLTPCGHRADNAG >Mature_718_residues MLAEPAGGTDRPAGRTAHELDIPPIRGGGVTRGDGAVQADSAVQASGAVQAVAVISGGVVGPAPDTRETTGPRGAVDMLA VVVVSLLAVAVQAVLWERFRQPLWYDELWRPHFVAEPPGTFWSELSVANTPSAIGSMGLLRVCGDVFGWHAWALRLPSAV PLVALAAGTWLLARRLTGRTAAFTAALTVTLGGTVVDLASQVKPYTLDAACALAVVMLWMRAASTTRALLWSRFAVGVLA LFSLPAVFLIVPLTVVDVARPLHGAYGWAGRRTAARPAARRAFRPPARAAVRAALCDAPAVVIAGLHAALFVLHQSGQRA STFWDDHFLAGRGLPDGIRFVADQLAATAAGAPPGIDRYDPNLVHPLTDSSDPAVIVLGCAVAITFLAGVVTLARRPDGR VLLVATGGAELMVLAASAGRYWPFGAVRTNVFLVPLLTVVAAAGAATLARTARVAWAGAGVAGRPGDGPSGGDPAGGRAA GGRTAGWQRTAGWQRTAAGLLAAVTAVTVLAAAAVPAAAVSALHPLWEERGDRRPIDLMVDATVTARRLYRPGDLVVVGG RLARAGWLYGMEVSQDGASDDRTPGQDAAGQSAAGQDAPAANTAGQGPTRQDAPGQERPGGPGADVVTGPVGPRVPRSST VFLTAIGDGGVGRALTRRAPGPEGRVLLFVLAYDRRGTGHSLDEARAAGWCPAWTHDFELTGTLRVLTPCGHRADNAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73856; Mature: 73856
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEPAGGTDRPAGRTAHELDIPPIRGGGVTRGDGAVQADSAVQASGAVQAVAVISGGVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHCCCCC GPAPDTRETTGPRGAVDMLAVVVVSLLAVAVQAVLWERFRQPLWYDELWRPHFVAEPPGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCC FWSELSVANTPSAIGSMGLLRVCGDVFGWHAWALRLPSAVPLVALAAGTWLLARRLTGRT HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH AAFTAALTVTLGGTVVDLASQVKPYTLDAACALAVVMLWMRAASTTRALLWSRFAVGVLA HHHEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSLPAVFLIVPLTVVDVARPLHGAYGWAGRRTAARPAARRAFRPPARAAVRAALCDAPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCHH VVIAGLHAALFVLHQSGQRASTFWDDHFLAGRGLPDGIRFVADQLAATAAGAPPGIDRYD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PNLVHPLTDSSDPAVIVLGCAVAITFLAGVVTLARRPDGRVLLVATGGAELMVLAASAGR CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCC YWPFGAVRTNVFLVPLLTVVAAAGAATLARTARVAWAGAGVAGRPGDGPSGGDPAGGRAA CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC GGRTAGWQRTAGWQRTAAGLLAAVTAVTVLAAAAVPAAAVSALHPLWEERGDRRPIDLMV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE DATVTARRLYRPGDLVVVGGRLARAGWLYGMEVSQDGASDDRTPGQDAAGQSAAGQDAPA ECHHHHHHHCCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC ANTAGQGPTRQDAPGQERPGGPGADVVTGPVGPRVPRSSTVFLTAIGDGGVGRALTRRAP CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCC GPEGRVLLFVLAYDRRGTGHSLDEARAAGWCPAWTHDFELTGTLRVLTPCGHRADNAG CCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCC >Mature Secondary Structure MLAEPAGGTDRPAGRTAHELDIPPIRGGGVTRGDGAVQADSAVQASGAVQAVAVISGGVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHCCCCC GPAPDTRETTGPRGAVDMLAVVVVSLLAVAVQAVLWERFRQPLWYDELWRPHFVAEPPGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCC FWSELSVANTPSAIGSMGLLRVCGDVFGWHAWALRLPSAVPLVALAAGTWLLARRLTGRT HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH AAFTAALTVTLGGTVVDLASQVKPYTLDAACALAVVMLWMRAASTTRALLWSRFAVGVLA HHHEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSLPAVFLIVPLTVVDVARPLHGAYGWAGRRTAARPAARRAFRPPARAAVRAALCDAPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCHH VVIAGLHAALFVLHQSGQRASTFWDDHFLAGRGLPDGIRFVADQLAATAAGAPPGIDRYD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PNLVHPLTDSSDPAVIVLGCAVAITFLAGVVTLARRPDGRVLLVATGGAELMVLAASAGR CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCC YWPFGAVRTNVFLVPLLTVVAAAGAATLARTARVAWAGAGVAGRPGDGPSGGDPAGGRAA CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC GGRTAGWQRTAGWQRTAAGLLAAVTAVTVLAAAAVPAAAVSALHPLWEERGDRRPIDLMV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE DATVTARRLYRPGDLVVVGGRLARAGWLYGMEVSQDGASDDRTPGQDAAGQSAAGQDAPA ECHHHHHHHCCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC ANTAGQGPTRQDAPGQERPGGPGADVVTGPVGPRVPRSSTVFLTAIGDGGVGRALTRRAP CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCC GPEGRVLLFVLAYDRRGTGHSLDEARAAGWCPAWTHDFELTGTLRVLTPCGHRADNAG CCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA