| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318968
Identifier: 158318968
GI number: 158318968
Start: 8853974
End: 8854519
Strand: Direct
Name: 158318968
Synonym: Franean1_7251
Alternate gene names: NA
Gene position: 8853974-8854519 (Clockwise)
Preceding gene: 158318967
Following gene: 158318969
Centisome position: 98.57
GC content: 72.89
Gene sequence:
>546_bases TTGCTCGCCAGCTGTCTGCTGGTCGGTTGCCTGGTCGTCCAGGGCTGCTCGGGCTCCGATGACAGCGCGGCGCCCCCGTC CACCCCGGCGAGCGGCACACCGGGCGCGAGCCAGCAGCCGACCGCCTCCACCGCCCCGCCGGCGGGAACGCCGACCGCGA GCCGCACCACCCGGATCCAGGGAGCGGACGGGGACGTCGAGGTCGGCTTCGTCGGGCTGCGGGTCGACGGCCAACTCGCC CGCCTCGATCTGCTCTTCACCCCGCGCTACGCCAAGGACCCGGGCACCGGCATCACGCTCTACGACATGGCCGGCCGGCG CGACGCCGCTGTCACCCTGGTCGACTCCGTGAACCTACGCCGCTACACCGTCGTGCGGGACTCCGCCGGAGTGGCGCTGG GCGCCGCCTCGGGAACCACCCGGACCCGCAACAACGTGCCTGTGACCGGCTCGTTCACCTTCGCCGCACCGCCCGCCGAC GTGACCACCGTGGACGTCTACCTCAACGACCGGGTGATCGTCGACGACGCCGCGATCACGCGTTGA
Upstream 100 bases:
>100_bases CCTGCCCCGGCTCACCCCAGCGACGACGCCCGTCCCGGAGATGCCACCCGCTCCGGCGACGACGCTGGATCCGAGTAAGC GCCCGCGGAGTGCGTCCGCC
Downstream 100 bases:
>100_bases GCGCGCTCCCGCGGCCCCCCGCCGCGACAGCGACAGTGACGGCGATCGCGGGCCGGGCCGCCCGGCTGGCTCTGGTCACC GCGGCGCTCTGGGTGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLASCLLVGCLVVQGCSGSDDSAAPPSTPASGTPGASQQPTASTAPPAGTPTASRTTRIQGADGDVEVGFVGLRVDGQLA RLDLLFTPRYAKDPGTGITLYDMAGRRDAAVTLVDSVNLRRYTVVRDSAGVALGAASGTTRTRNNVPVTGSFTFAAPPAD VTTVDVYLNDRVIVDDAAITR
Sequences:
>Translated_181_residues MLASCLLVGCLVVQGCSGSDDSAAPPSTPASGTPGASQQPTASTAPPAGTPTASRTTRIQGADGDVEVGFVGLRVDGQLA RLDLLFTPRYAKDPGTGITLYDMAGRRDAAVTLVDSVNLRRYTVVRDSAGVALGAASGTTRTRNNVPVTGSFTFAAPPAD VTTVDVYLNDRVIVDDAAITR >Mature_181_residues MLASCLLVGCLVVQGCSGSDDSAAPPSTPASGTPGASQQPTASTAPPAGTPTASRTTRIQGADGDVEVGFVGLRVDGQLA RLDLLFTPRYAKDPGTGITLYDMAGRRDAAVTLVDSVNLRRYTVVRDSAGVALGAASGTTRTRNNVPVTGSFTFAAPPAD VTTVDVYLNDRVIVDDAAITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18484; Mature: 18484
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASCLLVGCLVVQGCSGSDDSAAPPSTPASGTPGASQQPTASTAPPAGTPTASRTTRIQ CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GADGDVEVGFVGLRVDGQLARLDLLFTPRYAKDPGTGITLYDMAGRRDAAVTLVDSVNLR CCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCE RYTVVRDSAGVALGAASGTTRTRNNVPVTGSFTFAAPPADVTTVDVYLNDRVIVDDAAIT EEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCC R C >Mature Secondary Structure MLASCLLVGCLVVQGCSGSDDSAAPPSTPASGTPGASQQPTASTAPPAGTPTASRTTRIQ CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GADGDVEVGFVGLRVDGQLARLDLLFTPRYAKDPGTGITLYDMAGRRDAAVTLVDSVNLR CCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCE RYTVVRDSAGVALGAASGTTRTRNNVPVTGSFTFAAPPADVTTVDVYLNDRVIVDDAAIT EEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA