| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318967
Identifier: 158318967
GI number: 158318967
Start: 8852618
End: 8853661
Strand: Direct
Name: 158318967
Synonym: Franean1_7250
Alternate gene names: NA
Gene position: 8852618-8853661 (Clockwise)
Preceding gene: 158318965
Following gene: 158318968
Centisome position: 98.56
GC content: 76.63
Gene sequence:
>1044_bases GTGACGAGTCCAAGCTCGGACGTCGACATGCCCGTGCTGGCTGAGCAGGCGAGGACCATCCTCGCCGGCGGCCGCTGCGC GCTGCTCACGCTGCCCTGCGCCCACGTTCGGGGCTGGGTCGGACTCATCGACGACGGCGGCGAGCCCCTGCTGCTCGTGG GCGCCGACAGCCCGCCCGCGCGGTGCGCGGACTCCGGCCGCCGCGCACGCGTCGACGTGCCCGGCCACAACGGGGAGCGC CTGGTCCTCGCGGGGGTGCTGGCCTCGGCGGCGGAGACCGCCGACGAGCTCGTCCAACGCCTGGGCAACCTGGGGCGCAG CATCACGGTGACCTCCGGCGACATCTCCGATCTGCGTGTCCTCTCCGTGGCCGTGGACGAGGTGCTCATCTGCCTGCCCG GCCGCGCCGAAGCGCCGGCCGGCGCCACCCGGGCACCGGTCGCCGGCCGGACAGCCGCCGACCGGACAGCCGCCGGCTCC GTGCCGGTCGCGACCGAGCTCGCGGCAGGCACCGAAGCCGCACACGCCGAGCTGGCCGCGGGCACGGAACTGGCTACCGA CACGGAAGCGGCGGGTGCCGAACTGGCGGCGGGCCCGGAGGTCGTGGAGGCTCCGGCCCCGCGGCGGTCCCGGGTCACCC GCCGGGCGCGGGGCACGCGGCGCGACGCGGCGGCACGTCCCGGCGGCCGCTGGTCGTCGCTCGGGCCGGCCCGCCGCGTC GAGCTCACCTCGTACGCCCTCGCCGAGCCCGACCTCGTGACGGCCTACGCCCCGGACCTGATCGAGCACCTCAACAAGGC CCACGCCGCCCAGATGCGCCAGCTCGCCGCGCGCGGCGTCACGGCGGCCGGGAGCATCTGCGCCGACGAGGTGATCGGCG CGTCGGTGACCTCGCTCGACCGGGCCGGCCTGGACATGTGGCGGATCGGCCCCGACGGCGCCGACGCCGTCCGGGTGCTG TTCCGGTCGCCGCTGGCCGAACCTCGCTCGCTCGGGCTCGAGCTGCGCCTCCTGCTGGAAGAGGCGGAGCACGGAACCGA ATGA
Upstream 100 bases:
>100_bases AGTGTTGATCTGAGACAGGGGACCACAACTGGACGAAAGGCTTGACCATCGGGCTCTCGACGACTTAAGTAAGCCTTACC TGATGACAGGAGGAGGCCCG
Downstream 100 bases:
>100_bases GCGGCCAGAACAGGCCGGAACCGCCCGCGGACGGACCCGGCCCCGCCCCGGCGCTGCTGGGCGAGAGCGCAGCGCGCCCG CTCTCGCCGTTCGACCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTSPSSDVDMPVLAEQARTILAGGRCALLTLPCAHVRGWVGLIDDGGEPLLLVGADSPPARCADSGRRARVDVPGHNGER LVLAGVLASAAETADELVQRLGNLGRSITVTSGDISDLRVLSVAVDEVLICLPGRAEAPAGATRAPVAGRTAADRTAAGS VPVATELAAGTEAAHAELAAGTELATDTEAAGAELAAGPEVVEAPAPRRSRVTRRARGTRRDAAARPGGRWSSLGPARRV ELTSYALAEPDLVTAYAPDLIEHLNKAHAAQMRQLAARGVTAAGSICADEVIGASVTSLDRAGLDMWRIGPDGADAVRVL FRSPLAEPRSLGLELRLLLEEAEHGTE
Sequences:
>Translated_347_residues MTSPSSDVDMPVLAEQARTILAGGRCALLTLPCAHVRGWVGLIDDGGEPLLLVGADSPPARCADSGRRARVDVPGHNGER LVLAGVLASAAETADELVQRLGNLGRSITVTSGDISDLRVLSVAVDEVLICLPGRAEAPAGATRAPVAGRTAADRTAAGS VPVATELAAGTEAAHAELAAGTELATDTEAAGAELAAGPEVVEAPAPRRSRVTRRARGTRRDAAARPGGRWSSLGPARRV ELTSYALAEPDLVTAYAPDLIEHLNKAHAAQMRQLAARGVTAAGSICADEVIGASVTSLDRAGLDMWRIGPDGADAVRVL FRSPLAEPRSLGLELRLLLEEAEHGTE >Mature_346_residues TSPSSDVDMPVLAEQARTILAGGRCALLTLPCAHVRGWVGLIDDGGEPLLLVGADSPPARCADSGRRARVDVPGHNGERL VLAGVLASAAETADELVQRLGNLGRSITVTSGDISDLRVLSVAVDEVLICLPGRAEAPAGATRAPVAGRTAADRTAAGSV PVATELAAGTEAAHAELAAGTELATDTEAAGAELAAGPEVVEAPAPRRSRVTRRARGTRRDAAARPGGRWSSLGPARRVE LTSYALAEPDLVTAYAPDLIEHLNKAHAAQMRQLAARGVTAAGSICADEVIGASVTSLDRAGLDMWRIGPDGADAVRVLF RSPLAEPRSLGLELRLLLEEAEHGTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35722; Mature: 35590
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSSDVDMPVLAEQARTILAGGRCALLTLPCAHVRGWVGLIDDGGEPLLLVGADSPPA CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCCEEEEECCCCEEEEEECCCCCH RCADSGRRARVDVPGHNGERLVLAGVLASAAETADELVQRLGNLGRSITVTSGDISDLRV HHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH LSVAVDEVLICLPGRAEAPAGATRAPVAGRTAADRTAAGSVPVATELAAGTEAAHAELAA HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHC GTELATDTEAAGAELAAGPEVVEAPAPRRSRVTRRARGTRRDAAARPGGRWSSLGPARRV CCCCCCCCHHCCCHHCCCCHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEE ELTSYALAEPDLVTAYAPDLIEHLNKAHAAQMRQLAARGVTAAGSICADEVIGASVTSLD EEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCHHHHHH RAGLDMWRIGPDGADAVRVLFRSPLAEPRSLGLELRLLLEEAEHGTE HCCCCEEEECCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure TSPSSDVDMPVLAEQARTILAGGRCALLTLPCAHVRGWVGLIDDGGEPLLLVGADSPPA CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCCEEEEECCCCEEEEEECCCCCH RCADSGRRARVDVPGHNGERLVLAGVLASAAETADELVQRLGNLGRSITVTSGDISDLRV HHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH LSVAVDEVLICLPGRAEAPAGATRAPVAGRTAADRTAAGSVPVATELAAGTEAAHAELAA HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHC GTELATDTEAAGAELAAGPEVVEAPAPRRSRVTRRARGTRRDAAARPGGRWSSLGPARRV CCCCCCCCHHCCCHHCCCCHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEE ELTSYALAEPDLVTAYAPDLIEHLNKAHAAQMRQLAARGVTAAGSICADEVIGASVTSLD EEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCHHHHHH RAGLDMWRIGPDGADAVRVLFRSPLAEPRSLGLELRLLLEEAEHGTE HCCCCEEEECCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA