| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318961
Identifier: 158318961
GI number: 158318961
Start: 8846463
End: 8847611
Strand: Reverse
Name: 158318961
Synonym: Franean1_7244
Alternate gene names: NA
Gene position: 8847611-8846463 (Counterclockwise)
Preceding gene: 158318966
Following gene: 158318960
Centisome position: 98.5
GC content: 76.07
Gene sequence:
>1149_bases ATGGTCAGTGCTCGGATCACCCCTCGGATCACCTCCCGGCCGGCGCGCCTCATGCCCGCCCTGGCCCGGGGCGCGGGTGC GGCCCTTCTCGCGTTCCTGGTCGGTGCGCTGTGGCTGGTCGCGCTCGCCCGCCCGGCGTCCGCGCACACCGTCGGCGGGG CCGGCCCGACGAACTACCACACCACGCTCACCGGGGACCCGGCCGTACCCGGTGTGCGGCTGAGCGTCGTCGAGAACGGG AACCGGGTGCGGCTGGTGGCCACGGCGGGCTTTCCCATCCTCGTCGAGGGATACGAGAAGGAACCCTACCTACGCCTCGA CACCCGCGGAGTGTGGGAGAACCGGCGTTCCTCGGCCACGTACCTCAACGCCAGCCGCACCGGCGACGACCCCGGCCCAG CCGACGTGGTCGACCCGTCGGCCCCGCCGGACTGGGTGCGGGTCTCCGCGGCGCCGGGCGGCCGCGTCGAGGCGTTCTGG CACGACCACCGGGTCCACTGGATGGGGTCGGCGGACCCGCCCGCGGTGCGCGCGGCGCCGGACCAGCGGCACCGGATCCA GGACTGGTCCGTCCCGCTGACGGTCAGCGGGCGGCAAGCCGTCTACACGGGGACGCTCGAGTGGATCCCCGGCCCGTCGC CGCTGCCGTGGGCGGCGGGCACGGTCGCGGTGCTGGCCGGCACCGCCGCGCTGGGTCTCCTCCGGCAGGCGCGGTGGCCG CTCGCGGCCGTGCTGGCCGGTCTCGTCGCGGTCGACGCGACGCACTCCGCGCTGGTCGCGGCGGCGAACGCGGAGGGCCG CCTCGACGCCTTCGTCTGGGGCAACGCCGTGCAGATCGCCGTGTGGGCGGGCGCCCTGGCCGGCGCGGTCCTCATCGTCC GGCGCTCGCCGACGGGGCTCTACCTGGCGGTGAGCGCCGGGCTGCTGATCGCCGTCCTCGGCGGCCTGCCCGATCTCGGG GTGTTCGTCCGCTCCGGCACGCCGGTGGTCGGCCCGGTGCTCGTGGTCCGGGTGGTCACCGCGGTGACGCTGGGCGCTGG CGCGGGGCTGGGGCTCGCGGTGTGGCTGACATCGCGACGCCAGCCCGAGATGTCCGTTTCATCCGGGGCGCCGGAGGTGT CGGGGGTGTCCGGGGTGTCCGTCCCGTGA
Upstream 100 bases:
>100_bases GAAACCGCCGGTGTAGGCCGAAACTGTCAGTGGGCCGAAACTGTCGGAGCCGGGTGAAACCGTCTCGCCATGTTCCGCGC GACCGTACGCTCAGACCGTC
Downstream 100 bases:
>100_bases CAAGGAATGTGGTCCTTGGCGCCAGTGACGTCCCCGCGTGGCAGGCTTGCCGACTGTGACAGGTATGCCGGGGACGAGCA GGCTCGCGAGAGCAGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MVSARITPRITSRPARLMPALARGAGAALLAFLVGALWLVALARPASAHTVGGAGPTNYHTTLTGDPAVPGVRLSVVENG NRVRLVATAGFPILVEGYEKEPYLRLDTRGVWENRRSSATYLNASRTGDDPGPADVVDPSAPPDWVRVSAAPGGRVEAFW HDHRVHWMGSADPPAVRAAPDQRHRIQDWSVPLTVSGRQAVYTGTLEWIPGPSPLPWAAGTVAVLAGTAALGLLRQARWP LAAVLAGLVAVDATHSALVAAANAEGRLDAFVWGNAVQIAVWAGALAGAVLIVRRSPTGLYLAVSAGLLIAVLGGLPDLG VFVRSGTPVVGPVLVVRVVTAVTLGAGAGLGLAVWLTSRRQPEMSVSSGAPEVSGVSGVSVP
Sequences:
>Translated_382_residues MVSARITPRITSRPARLMPALARGAGAALLAFLVGALWLVALARPASAHTVGGAGPTNYHTTLTGDPAVPGVRLSVVENG NRVRLVATAGFPILVEGYEKEPYLRLDTRGVWENRRSSATYLNASRTGDDPGPADVVDPSAPPDWVRVSAAPGGRVEAFW HDHRVHWMGSADPPAVRAAPDQRHRIQDWSVPLTVSGRQAVYTGTLEWIPGPSPLPWAAGTVAVLAGTAALGLLRQARWP LAAVLAGLVAVDATHSALVAAANAEGRLDAFVWGNAVQIAVWAGALAGAVLIVRRSPTGLYLAVSAGLLIAVLGGLPDLG VFVRSGTPVVGPVLVVRVVTAVTLGAGAGLGLAVWLTSRRQPEMSVSSGAPEVSGVSGVSVP >Mature_382_residues MVSARITPRITSRPARLMPALARGAGAALLAFLVGALWLVALARPASAHTVGGAGPTNYHTTLTGDPAVPGVRLSVVENG NRVRLVATAGFPILVEGYEKEPYLRLDTRGVWENRRSSATYLNASRTGDDPGPADVVDPSAPPDWVRVSAAPGGRVEAFW HDHRVHWMGSADPPAVRAAPDQRHRIQDWSVPLTVSGRQAVYTGTLEWIPGPSPLPWAAGTVAVLAGTAALGLLRQARWP LAAVLAGLVAVDATHSALVAAANAEGRLDAFVWGNAVQIAVWAGALAGAVLIVRRSPTGLYLAVSAGLLIAVLGGLPDLG VFVRSGTPVVGPVLVVRVVTAVTLGAGAGLGLAVWLTSRRQPEMSVSSGAPEVSGVSGVSVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39394; Mature: 39394
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSARITPRITSRPARLMPALARGAGAALLAFLVGALWLVALARPASAHTVGGAGPTNYH CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE TTLTGDPAVPGVRLSVVENGNRVRLVATAGFPILVEGYEKEPYLRLDTRGVWENRRSSAT EEECCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCE YLNASRTGDDPGPADVVDPSAPPDWVRVSAAPGGRVEAFWHDHRVHWMGSADPPAVRAAP EEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCEEEECCCCCCCCEECCC DQRHRIQDWSVPLTVSGRQAVYTGTLEWIPGPSPLPWAAGTVAVLAGTAALGLLRQARWP CHHCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LAAVLAGLVAVDATHSALVAAANAEGRLDAFVWGNAVQIAVWAGALAGAVLIVRRSPTGL HHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCEEEEEEEHHHHCCEEEEEEECCCCE YLAVSAGLLIAVLGGLPDLGVFVRSGTPVVGPVLVVRVVTAVTLGAGAGLGLAVWLTSRR EEEEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC QPEMSVSSGAPEVSGVSGVSVP CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVSARITPRITSRPARLMPALARGAGAALLAFLVGALWLVALARPASAHTVGGAGPTNYH CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE TTLTGDPAVPGVRLSVVENGNRVRLVATAGFPILVEGYEKEPYLRLDTRGVWENRRSSAT EEECCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCE YLNASRTGDDPGPADVVDPSAPPDWVRVSAAPGGRVEAFWHDHRVHWMGSADPPAVRAAP EEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCEEEECCCCCCCCEECCC DQRHRIQDWSVPLTVSGRQAVYTGTLEWIPGPSPLPWAAGTVAVLAGTAALGLLRQARWP CHHCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LAAVLAGLVAVDATHSALVAAANAEGRLDAFVWGNAVQIAVWAGALAGAVLIVRRSPTGL HHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCEEEEEEEHHHHCCEEEEEEECCCCE YLAVSAGLLIAVLGGLPDLGVFVRSGTPVVGPVLVVRVVTAVTLGAGAGLGLAVWLTSRR EEEEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC QPEMSVSSGAPEVSGVSGVSVP CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA