| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318960
Identifier: 158318960
GI number: 158318960
Start: 8845685
End: 8846398
Strand: Reverse
Name: 158318960
Synonym: Franean1_7243
Alternate gene names: NA
Gene position: 8846398-8845685 (Counterclockwise)
Preceding gene: 158318961
Following gene: 158318959
Centisome position: 98.49
GC content: 79.13
Gene sequence:
>714_bases ATGCCGGGGACGAGCAGGCTCGCGAGAGCAGCCGTCTTCGGTGTCTCCTCGGCCTGCCTGGCGCTCGCGGCGCACGTCGC CGCGGGCGGGGAACGCCCGCCCGCCCTGCTGGTCGCGGCCGGCGCCGGGCTTCTCACCCGGGTCGCCTACGGCCTCGCCG ACCGGGAACGCGCGCTGGGGCAGATCCTCGGGGCCGTCCTGGCCGCGCAGGCCACGCTGCACACCGCCTTCGTTCTCGCG ACGCACCACCCCCCCGGCGCGGGCGGAGCCGGCTCGGCACCGGCCGCGGTCGCGGTGGCGGGGCCCGGGGTCGGTGAGCA CCTGGTGGCTTCCCTGTTTCCCGGCGGGTCGATGGTTGCCGGGCACGCCTGCGCCGCGTCGTGCGTGGCCGTGCTGCTGC ACCGGTGCGAGCGGCGCCTGTGGTCCACCGCGGCGCTGCGGTTGGCGGTGGAACGCGCCGTCACCGCCGTGGCGCGGATG ACGTCCAGCGTGCTCGCCCGGCTGCGCGCCGCGGGGCGGATCGTGCCGCTCGCCGCGGCGGCGCGGCCGCGGGTCGCCGC CGCGCCGGTGACCTCGATGCCCGGGCGGGTCGCCGGCGGCGGGGCCGGTCCGGGGATCCGGTGGCACGCTCATGTCCTCC TGCTCGGAACCGACGCCGCACGGCGCGGGCCGCCGACCCGTCGACCGGGGTCGAGTCTCCGACCGGCGCTCTGA
Upstream 100 bases:
>100_bases GAGGTGTCGGGGGTGTCCGGGGTGTCCGTCCCGTGACAAGGAATGTGGTCCTTGGCGCCAGTGACGTCCCCGCGTGGCAG GCTTGCCGACTGTGACAGGT
Downstream 100 bases:
>100_bases CAGCGCACGGCGGAAGCCGGCACGCGCGCGTCCGGAAGGTTCGCGCCGCTCGCGACGATGCGGCCTGCGATGCGGCCGTC GTGACGCTGCCGTGTCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPGTSRLARAAVFGVSSACLALAAHVAAGGERPPALLVAAGAGLLTRVAYGLADRERALGQILGAVLAAQATLHTAFVLA THHPPGAGGAGSAPAAVAVAGPGVGEHLVASLFPGGSMVAGHACAASCVAVLLHRCERRLWSTAALRLAVERAVTAVARM TSSVLARLRAAGRIVPLAAAARPRVAAAPVTSMPGRVAGGGAGPGIRWHAHVLLLGTDAARRGPPTRRPGSSLRPAL
Sequences:
>Translated_237_residues MPGTSRLARAAVFGVSSACLALAAHVAAGGERPPALLVAAGAGLLTRVAYGLADRERALGQILGAVLAAQATLHTAFVLA THHPPGAGGAGSAPAAVAVAGPGVGEHLVASLFPGGSMVAGHACAASCVAVLLHRCERRLWSTAALRLAVERAVTAVARM TSSVLARLRAAGRIVPLAAAARPRVAAAPVTSMPGRVAGGGAGPGIRWHAHVLLLGTDAARRGPPTRRPGSSLRPAL >Mature_236_residues PGTSRLARAAVFGVSSACLALAAHVAAGGERPPALLVAAGAGLLTRVAYGLADRERALGQILGAVLAAQATLHTAFVLAT HHPPGAGGAGSAPAAVAVAGPGVGEHLVASLFPGGSMVAGHACAASCVAVLLHRCERRLWSTAALRLAVERAVTAVARMT SSVLARLRAAGRIVPLAAAARPRVAAAPVTSMPGRVAGGGAGPGIRWHAHVLLLGTDAARRGPPTRRPGSSLRPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23437; Mature: 23305
Theoretical pI: Translated: 12.43; Mature: 12.43
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTSRLARAAVFGVSSACLALAAHVAAGGERPPALLVAAGAGLLTRVAYGLADRERALG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH QILGAVLAAQATLHTAFVLATHHPPGAGGAGSAPAAVAVAGPGVGEHLVASLFPGGSMVA HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHH GHACAASCVAVLLHRCERRLWSTAALRLAVERAVTAVARMTSSVLARLRAAGRIVPLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHC ARPRVAAAPVTSMPGRVAGGGAGPGIRWHAHVLLLGTDAARRGPPTRRPGSSLRPAL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PGTSRLARAAVFGVSSACLALAAHVAAGGERPPALLVAAGAGLLTRVAYGLADRERALG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH QILGAVLAAQATLHTAFVLATHHPPGAGGAGSAPAAVAVAGPGVGEHLVASLFPGGSMVA HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHH GHACAASCVAVLLHRCERRLWSTAALRLAVERAVTAVARMTSSVLARLRAAGRIVPLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHC ARPRVAAAPVTSMPGRVAGGGAGPGIRWHAHVLLLGTDAARRGPPTRRPGSSLRPAL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA