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The map label for this gene is 158318957

Identifier: 158318957

GI number: 158318957

Start: 8841018

End: 8842592

Strand: Direct

Name: 158318957

Synonym: Franean1_7240

Alternate gene names: NA

Gene position: 8841018-8842592 (Clockwise)

Preceding gene: 158318956

Following gene: 158318962

Centisome position: 98.43

GC content: 78.86

Gene sequence:

>1575_bases
ATGCCGAGGTCAGGAACGCCGTCACGGGGAGATGCTGAGCGGATGAACGACGACGCGGACCTGGTGGCGCGGGTTCGGCG
CGGCGATCGTCAGGCTTTCGATGACCTGTACAACCGCTACGCCGACGACGTCTTCTCGATGTGCCTGCTGATCCTCGGCG
ACCCGACGGTCGCGCGGGCGGCCGCCGGCACCGCGTTCGCCCTCGTGGCGAGGACGAGGCTCAACCCGCTCTCGGACCCG
ACCCGACTGCGCCCCTGGCTACTGGAGCTCGCCCGCGGCAGCGCGCTGGCCTGGTCGGGATCCCCGCAGGCGCGCAGCGT
TCCCGTCCCGCACGGCGTCTCACCCGAGGAGCTGCTCGACGGCGCCGTGGTGCCCGCGCCGGCCAGCCTGCGGGCCGGGC
TGGAGCGCACCTTCGACCGCGCGGCCGTCGCCGCCGAAGCCGCCGCGGCGGCCGCGAGCCGCCGAGCCGCCGAGCGCGCC
GGCTCCGAGTTCGCCGGTACCGAGCCTGCGGGCGTCGCGCCTGCCGGAGTCGACGACCTGGCCGCCGCGGCGGGCCTGGC
TGCCGGCGGGGTGCCGGGCCATCCCGGTGCCGCCGCCCCGAGCCGCCCGGCCGTCCCGGCCTTCACCGCCTCGGCCTTCC
CGACCCAGGACCGTCGCGGTCCGGCACCGGTCGCGGACGGTCGCCCCGCGGGCGGCTACGCCCCTGAGGACGCCGTAACC
ATCATCTCGCCGTCCACCGGGCAGTTGCGCACGCAGCGCCAGGACGACCAGCATGAGCAGACCATGGCACCGGCCGGCGC
CGGCGCCCAGGACCGGTACGGGAACGTCCTCCCGCTGATCCCCGTGGACCGCGCCTACCCGGGTGACGCCGCAGGGTCCG
GCGGGTTCGCCGACTTCCGGGCCCGGCCCGCGATCGCCGTGGCCGCCGCCCTGGTCGTCGCCGTCGCCGGGCTCACCGCC
GTCATCTCCTGGCCCGCGAGCGAGGCCGCGCTGGTCGCCGACGGCGGCCCCGGCATCGTCGCGATCGCCCCCTCGGCGCC
ACCCGGCCCCCTGCCGACGATCGCCCGGCCGCCGGTCGCGTCCGAGGCGCCCTCGCCCACTGTGGTGCCGACCGTCGCGG
GCGCCTACACGAGCCGTCCCGGTGTATCCCGCCCCGGCCAGGTCGTCCGCGAGGTCGACACCGGCCAGCGCGGCGCCGAC
CAGCCCGCCGCACCGCCCGCGCCGGCCCCGAGCACACCGCCGCCGCCCACCACGAACGCGCCCGCGCCGCCGGCGACGAC
CCCGCCGACGACACCGCCCGCGACGACCGGCCCCACCACGACCGCCGGCCCGACGACGGCGCCCCCGGCCACCACGGGAC
CCCCGGCCACGGGCACCCCGACGACGCCGCCGGACGGCGAGGCTCCGCCGCCGGCGACGACCTCCGAGCCCGCCCCGCCC
CCGAGCACCGCTCCGGCCCCGGCGCCGCCGACCAGTGAGGCACCGGCCCCGCCGGCGACGACCGCACCGGGACCGGCCGG
CGACCAGCGCCTCCCACCGGGCACCCGAGACGTGCAGAGCCCGTTCCCGGTCTAA

Upstream 100 bases:

>100_bases
CTTCCCAGCGTTCACCCCAACGGGATGACGCACCTCCTACTATTGACCTCGCCTGACCGGTGACCAGGCCGGCACCACAA
TGGTTGGGAGCCTGGTCCCG

Downstream 100 bases:

>100_bases
TGCCGAGTCGGAAGTAGCTCAACCGAAGCGCGTTGCCTCAGCCAGTCCATACGCGGCCGAGGCAACAGAGCGGGCGGAGT
TCAGCGGACGTCGTAGAAGA

Product: putative RNA polymerase sigma factor

Products: NA

Alternate protein names: Sigma-

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MPRSGTPSRGDAERMNDDADLVARVRRGDRQAFDDLYNRYADDVFSMCLLILGDPTVARAAAGTAFALVARTRLNPLSDP
TRLRPWLLELARGSALAWSGSPQARSVPVPHGVSPEELLDGAVVPAPASLRAGLERTFDRAAVAAEAAAAAASRRAAERA
GSEFAGTEPAGVAPAGVDDLAAAAGLAAGGVPGHPGAAAPSRPAVPAFTASAFPTQDRRGPAPVADGRPAGGYAPEDAVT
IISPSTGQLRTQRQDDQHEQTMAPAGAGAQDRYGNVLPLIPVDRAYPGDAAGSGGFADFRARPAIAVAAALVVAVAGLTA
VISWPASEAALVADGGPGIVAIAPSAPPGPLPTIARPPVASEAPSPTVVPTVAGAYTSRPGVSRPGQVVREVDTGQRGAD
QPAAPPAPAPSTPPPPTTNAPAPPATTPPTTPPATTGPTTTAGPTTAPPATTGPPATGTPTTPPDGEAPPPATTSEPAPP
PSTAPAPAPPTSEAPAPPATTAPGPAGDQRLPPGTRDVQSPFPV

Sequences:

>Translated_524_residues
MPRSGTPSRGDAERMNDDADLVARVRRGDRQAFDDLYNRYADDVFSMCLLILGDPTVARAAAGTAFALVARTRLNPLSDP
TRLRPWLLELARGSALAWSGSPQARSVPVPHGVSPEELLDGAVVPAPASLRAGLERTFDRAAVAAEAAAAAASRRAAERA
GSEFAGTEPAGVAPAGVDDLAAAAGLAAGGVPGHPGAAAPSRPAVPAFTASAFPTQDRRGPAPVADGRPAGGYAPEDAVT
IISPSTGQLRTQRQDDQHEQTMAPAGAGAQDRYGNVLPLIPVDRAYPGDAAGSGGFADFRARPAIAVAAALVVAVAGLTA
VISWPASEAALVADGGPGIVAIAPSAPPGPLPTIARPPVASEAPSPTVVPTVAGAYTSRPGVSRPGQVVREVDTGQRGAD
QPAAPPAPAPSTPPPPTTNAPAPPATTPPTTPPATTGPTTTAGPTTAPPATTGPPATGTPTTPPDGEAPPPATTSEPAPP
PSTAPAPAPPTSEAPAPPATTAPGPAGDQRLPPGTRDVQSPFPV
>Mature_523_residues
PRSGTPSRGDAERMNDDADLVARVRRGDRQAFDDLYNRYADDVFSMCLLILGDPTVARAAAGTAFALVARTRLNPLSDPT
RLRPWLLELARGSALAWSGSPQARSVPVPHGVSPEELLDGAVVPAPASLRAGLERTFDRAAVAAEAAAAAASRRAAERAG
SEFAGTEPAGVAPAGVDDLAAAAGLAAGGVPGHPGAAAPSRPAVPAFTASAFPTQDRRGPAPVADGRPAGGYAPEDAVTI
ISPSTGQLRTQRQDDQHEQTMAPAGAGAQDRYGNVLPLIPVDRAYPGDAAGSGGFADFRARPAIAVAAALVVAVAGLTAV
ISWPASEAALVADGGPGIVAIAPSAPPGPLPTIARPPVASEAPSPTVVPTVAGAYTSRPGVSRPGQVVREVDTGQRGADQ
PAAPPAPAPSTPPPPTTNAPAPPATTPPTTPPATTGPTTTAGPTTAPPATTGPPATGTPTTPPDGEAPPPATTSEPAPPP
STAPAPAPPTSEAPAPPATTAPGPAGDQRLPPGTRDVQSPFPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51948; Mature: 51817

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSGTPSRGDAERMNDDADLVARVRRGDRQAFDDLYNRYADDVFSMCLLILGDPTVARA
CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAGTAFALVARTRLNPLSDPTRLRPWLLELARGSALAWSGSPQARSVPVPHGVSPEELLD
HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHC
GAVVPAPASLRAGLERTFDRAAVAAEAAAAAASRRAAERAGSEFAGTEPAGVAPAGVDDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
AAAAGLAAGGVPGHPGAAAPSRPAVPAFTASAFPTQDRRGPAPVADGRPAGGYAPEDAVT
HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IISPSTGQLRTQRQDDQHEQTMAPAGAGAQDRYGNVLPLIPVDRAYPGDAAGSGGFADFR
EECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ARPAIAVAAALVVAVAGLTAVISWPASEAALVADGGPGIVAIAPSAPPGPLPTIARPPVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
SEAPSPTVVPTVAGAYTSRPGVSRPGQVVREVDTGQRGADQPAAPPAPAPSTPPPPTTNA
CCCCCCCEEHHHHCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPPATTPPTTPPATTGPTTTAGPTTAPPATTGPPATGTPTTPPDGEAPPPATTSEPAPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSTAPAPAPPTSEAPAPPATTAPGPAGDQRLPPGTRDVQSPFPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRSGTPSRGDAERMNDDADLVARVRRGDRQAFDDLYNRYADDVFSMCLLILGDPTVARA
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAGTAFALVARTRLNPLSDPTRLRPWLLELARGSALAWSGSPQARSVPVPHGVSPEELLD
HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHC
GAVVPAPASLRAGLERTFDRAAVAAEAAAAAASRRAAERAGSEFAGTEPAGVAPAGVDDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
AAAAGLAAGGVPGHPGAAAPSRPAVPAFTASAFPTQDRRGPAPVADGRPAGGYAPEDAVT
HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IISPSTGQLRTQRQDDQHEQTMAPAGAGAQDRYGNVLPLIPVDRAYPGDAAGSGGFADFR
EECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ARPAIAVAAALVVAVAGLTAVISWPASEAALVADGGPGIVAIAPSAPPGPLPTIARPPVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
SEAPSPTVVPTVAGAYTSRPGVSRPGQVVREVDTGQRGADQPAAPPAPAPSTPPPPTTNA
CCCCCCCEEHHHHCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPPATTPPTTPPATTGPTTTAGPTTAPPATTGPPATGTPTTPPDGEAPPPATTSEPAPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSTAPAPAPPTSEAPAPPATTAPGPAGDQRLPPGTRDVQSPFPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA