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The map label for this gene is pdxH [H]

Identifier: 158318947

GI number: 158318947

Start: 8827880

End: 8828644

Strand: Direct

Name: pdxH [H]

Synonym: Franean1_7230

Alternate gene names: 158318947

Gene position: 8827880-8828644 (Clockwise)

Preceding gene: 158318944

Following gene: 158318948

Centisome position: 98.28

GC content: 70.2

Gene sequence:

>765_bases
ATGGCCGCCCATCCGCCCATGCACGAACCGCCCGTGTATGAACCGCCCGTGCCCGACCCGGCTGTGCAGCGGCGCGGCTA
CCACCCGGGCCGGTTCGACGAGCGGATGCTCGCTCCAACCTGGCTCGAACAGTTTCAGGAATGGTTCACCGACGCCTCGG
CCCCGAGGGCGGGGATCCGCGAGCCCAACGCGATGATCTTCTCCACCGCCGACGAGGCCGGGCGGCCGAGTTCCCGCACC
GTCCTGATGAAGGGGTTCGACGCACGCGGATTCACGCTGTTCACGAACTACACGTCGACGAAGGCCCGCGAGGCCGCGGC
GAATCCGTACGGGTCGCTGCTCTTCCCGTGGTACCCGCTGGAACGCCAGGTGATCGTCGCTGGTTCGATTGAACGCGTGT
CACGGGCGGAGAGCGAGACCTATTTCCGGTCCCGGCCGCGGGGATCTCAGCTCGGGGCGTGGGCGAGCCACCAGTCCCAG
GTGATCGACTCGCGCGCGGTACTCACCGAGCGGCTCGCCCAGCTGAGACAGAGGTGGCCGGCCACCGAACCGGTGCCGGC
TCCCCCCTTTTGGGGGGGACTGCGGCTCGTCCCGACCTCGATCGAGTTCTGGCAGGGGCGCCCGGACCGCCTCCACGACC
GTCTGCGCTATCGCCTAACCACTCTCCGTCGAGCCTCCGGCAGCACACCGGACGCCGGGCCGGGCGACGTACCGAGCAGG
CCCGCCGACGCCCTGGGATGGGTCGTCGAGCGCCTGGCGCCCTGA

Upstream 100 bases:

>100_bases
GGCGGTTGCCGTGGTTTCGACCGATCACCTGGAGCAGGACCGCCCGAGGTGATGCCAGTCACATCGACGGAGGGTGCCAC
CGGGCTGCCAGGATCGGGGC

Downstream 100 bases:

>100_bases
AGGCGGGCGAACCGGTCTATATCGTCACAGCGTCCGAAATGCCAGCGCTGTCATTCCAGGGTGACGGGCGGGCCGGCGGG
CGCGCGGCCGTGATCCCGAT

Product: pyridoxamine 5'-phosphate oxidase

Products: NA

Alternate protein names: PNP/PMP oxidase; PNPOx; Pyridoxal 5'-phosphate synthase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAAHPPMHEPPVYEPPVPDPAVQRRGYHPGRFDERMLAPTWLEQFQEWFTDASAPRAGIREPNAMIFSTADEAGRPSSRT
VLMKGFDARGFTLFTNYTSTKAREAAANPYGSLLFPWYPLERQVIVAGSIERVSRAESETYFRSRPRGSQLGAWASHQSQ
VIDSRAVLTERLAQLRQRWPATEPVPAPPFWGGLRLVPTSIEFWQGRPDRLHDRLRYRLTTLRRASGSTPDAGPGDVPSR
PADALGWVVERLAP

Sequences:

>Translated_254_residues
MAAHPPMHEPPVYEPPVPDPAVQRRGYHPGRFDERMLAPTWLEQFQEWFTDASAPRAGIREPNAMIFSTADEAGRPSSRT
VLMKGFDARGFTLFTNYTSTKAREAAANPYGSLLFPWYPLERQVIVAGSIERVSRAESETYFRSRPRGSQLGAWASHQSQ
VIDSRAVLTERLAQLRQRWPATEPVPAPPFWGGLRLVPTSIEFWQGRPDRLHDRLRYRLTTLRRASGSTPDAGPGDVPSR
PADALGWVVERLAP
>Mature_253_residues
AAHPPMHEPPVYEPPVPDPAVQRRGYHPGRFDERMLAPTWLEQFQEWFTDASAPRAGIREPNAMIFSTADEAGRPSSRTV
LMKGFDARGFTLFTNYTSTKAREAAANPYGSLLFPWYPLERQVIVAGSIERVSRAESETYFRSRPRGSQLGAWASHQSQV
IDSRAVLTERLAQLRQRWPATEPVPAPPFWGGLRLVPTSIEFWQGRPDRLHDRLRYRLTTLRRASGSTPDAGPGDVPSRP
ADALGWVVERLAP

Specific function: Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) [H]

COG id: COG0259

COG function: function code H; Pyridoxamine-phosphate oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyridoxamine 5'-phosphate oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922498, Length=219, Percent_Identity=43.37899543379, Blast_Score=165, Evalue=4e-41,
Organism=Escherichia coli, GI1787926, Length=231, Percent_Identity=41.991341991342, Blast_Score=172, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17553712, Length=180, Percent_Identity=38.3333333333333, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6319509, Length=198, Percent_Identity=46.969696969697, Blast_Score=176, Evalue=2e-45,
Organism=Drosophila melanogaster, GI45551845, Length=210, Percent_Identity=43.8095238095238, Blast_Score=149, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24644901, Length=210, Percent_Identity=43.8095238095238, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24644903, Length=166, Percent_Identity=32.5301204819277, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000659
- InterPro:   IPR019740
- InterPro:   IPR019576
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF10590 PNPOx_C; PF01243 Pyridox_oxidase [H]

EC number: =1.4.3.5 [H]

Molecular weight: Translated: 28586; Mature: 28454

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS01064 PYRIDOX_OXIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHPPMHEPPVYEPPVPDPAVQRRGYHPGRFDERMLAPTWLEQFQEWFTDASAPRAGIR
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCC
EPNAMIFSTADEAGRPSSRTVLMKGFDARGFTLFTNYTSTKAREAAANPYGSLLFPWYPL
CCCEEEEECCHHCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCEECCCCCC
ERQVIVAGSIERVSRAESETYFRSRPRGSQLGAWASHQSQVIDSRAVLTERLAQLRQRWP
CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATEPVPAPPFWGGLRLVPTSIEFWQGRPDRLHDRLRYRLTTLRRASGSTPDAGPGDVPSR
CCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PADALGWVVERLAP
CHHHHHHHHHHHCC
>Mature Secondary Structure 
AAHPPMHEPPVYEPPVPDPAVQRRGYHPGRFDERMLAPTWLEQFQEWFTDASAPRAGIR
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCC
EPNAMIFSTADEAGRPSSRTVLMKGFDARGFTLFTNYTSTKAREAAANPYGSLLFPWYPL
CCCEEEEECCHHCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCEECCCCCC
ERQVIVAGSIERVSRAESETYFRSRPRGSQLGAWASHQSQVIDSRAVLTERLAQLRQRWP
CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ATEPVPAPPFWGGLRLVPTSIEFWQGRPDRLHDRLRYRLTTLRRASGSTPDAGPGDVPSR
CCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PADALGWVVERLAP
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA