Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318948

Identifier: 158318948

GI number: 158318948

Start: 8828998

End: 8829768

Strand: Direct

Name: 158318948

Synonym: Franean1_7231

Alternate gene names: NA

Gene position: 8828998-8829768 (Clockwise)

Preceding gene: 158318947

Following gene: 158318949

Centisome position: 98.3

GC content: 72.37

Gene sequence:

>771_bases
ATGCGGATCACAAGAATGCGGGCCATGGCGGCCGGCGTTCTCGGCGCGGCCCTGATCTCAGTGGCCACGCCGGCCTCAGC
AACCACACCGGAACCGACCCCGACGACGAGCGCCACGCCGACCGCGACGCCGACCCCGGACACGACCGGCGACATTCTCG
GCGGCGCCCCGACGCCCACCGGCACCCCGACGGCCGAGGCCACTGCGAGCCTCGACCCGAGCGCCACGCCGAGCGTCGAC
CCCTCCGCCACCCCCAGCGCGGACCCGAGCGCGACCCCCGGCATCGACGTGACCACCACGACGACCGGCACGCCCTCGCC
CACCCCGAGCTCGGGGACGGGCGACCCCATCCTCGACGGGTTCCTGTCGCTGCTGCCCTTCAAGGTGCCGCTCGACAAGG
AGATCGACGGCATCGAGGACTTCGATGTGAACCCGCTCGTCCTTACCTTCACCTGCGGCGCCTCGGGCCCTGAGTGGACG
CTGCGGAACACCTCCGACAAGGCCTTCGGCTTCGGCTGGTTCGACACCAGCCTCGGCGCCGGGATCTCGGAGATCGGCCC
CGGCCAGAGCCTGCCGCTGCAGACCCACGCGATGGCGGTCATCGCCTCCCCGTGGGACGCCGAGACCGGTTACCTCCTCG
TGACCGTTCCGACCGTGGGCGTCTCGGACTGCGCCGGGACGGCCCCGCCGGTCGACCCCCAGGTCTCGCTCCCCGTCGCC
GACCCGGCCGTGGCTACGGCGGTGCGGGCCGAGCCTTATTACACGAGATGA

Upstream 100 bases:

>100_bases
GCGCCCTGCGTCGACGCGCCGCCCTCCGGCCCGTCGATGCTTCGGCGGGCGCCGACGGCGGGTGTCGCGGCGACCCGTCA
CAGTCGAGGGAGACGGATTC

Downstream 100 bases:

>100_bases
CCAGCGGCGCCGGCATGACCAGCCACGTCGCGACTCCTCGCCACGACGCGACGTCCAACCGCGGCCCGCTGCCCGGCCGC
GATCCGGCACCGGGTGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRITRMRAMAAGVLGAALISVATPASATTPEPTPTTSATPTATPTPDTTGDILGGAPTPTGTPTAEATASLDPSATPSVD
PSATPSADPSATPGIDVTTTTTGTPSPTPSSGTGDPILDGFLSLLPFKVPLDKEIDGIEDFDVNPLVLTFTCGASGPEWT
LRNTSDKAFGFGWFDTSLGAGISEIGPGQSLPLQTHAMAVIASPWDAETGYLLVTVPTVGVSDCAGTAPPVDPQVSLPVA
DPAVATAVRAEPYYTR

Sequences:

>Translated_256_residues
MRITRMRAMAAGVLGAALISVATPASATTPEPTPTTSATPTATPTPDTTGDILGGAPTPTGTPTAEATASLDPSATPSVD
PSATPSADPSATPGIDVTTTTTGTPSPTPSSGTGDPILDGFLSLLPFKVPLDKEIDGIEDFDVNPLVLTFTCGASGPEWT
LRNTSDKAFGFGWFDTSLGAGISEIGPGQSLPLQTHAMAVIASPWDAETGYLLVTVPTVGVSDCAGTAPPVDPQVSLPVA
DPAVATAVRAEPYYTR
>Mature_256_residues
MRITRMRAMAAGVLGAALISVATPASATTPEPTPTTSATPTATPTPDTTGDILGGAPTPTGTPTAEATASLDPSATPSVD
PSATPSADPSATPGIDVTTTTTGTPSPTPSSGTGDPILDGFLSLLPFKVPLDKEIDGIEDFDVNPLVLTFTCGASGPEWT
LRNTSDKAFGFGWFDTSLGAGISEIGPGQSLPLQTHAMAVIASPWDAETGYLLVTVPTVGVSDCAGTAPPVDPQVSLPVA
DPAVATAVRAEPYYTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25720; Mature: 25720

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITRMRAMAAGVLGAALISVATPASATTPEPTPTTSATPTATPTPDTTGDILGGAPTPT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTPTAEATASLDPSATPSVDPSATPSADPSATPGIDVTTTTTGTPSPTPSSGTGDPILDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
FLSLLPFKVPLDKEIDGIEDFDVNPLVLTFTCGASGPEWTLRNTSDKAFGFGWFDTSLGA
HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEHHHHHCC
GISEIGPGQSLPLQTHAMAVIASPWDAETGYLLVTVPTVGVSDCAGTAPPVDPQVSLPVA
CHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCC
DPAVATAVRAEPYYTR
CCHHHHEEECCCCCCC
>Mature Secondary Structure
MRITRMRAMAAGVLGAALISVATPASATTPEPTPTTSATPTATPTPDTTGDILGGAPTPT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTPTAEATASLDPSATPSVDPSATPSADPSATPGIDVTTTTTGTPSPTPSSGTGDPILDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
FLSLLPFKVPLDKEIDGIEDFDVNPLVLTFTCGASGPEWTLRNTSDKAFGFGWFDTSLGA
HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEHHHHHCC
GISEIGPGQSLPLQTHAMAVIASPWDAETGYLLVTVPTVGVSDCAGTAPPVDPQVSLPVA
CHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCC
DPAVATAVRAEPYYTR
CCHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA