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The map label for this gene is 158318940

Identifier: 158318940

GI number: 158318940

Start: 8819236

End: 8819661

Strand: Reverse

Name: 158318940

Synonym: Franean1_7223

Alternate gene names: NA

Gene position: 8819661-8819236 (Counterclockwise)

Preceding gene: 158318945

Following gene: 158318939

Centisome position: 98.19

GC content: 74.41

Gene sequence:

>426_bases
ATGGAGAGCGTGAGCGCGGCGGAGCTCGCGTCCACCCTGCGCCTGTCGGTCATGAGGCTCTCCCGGCGAATGCGCCAGGA
ACGCTCCAGCACGCTGACCCCGACCCAGGTCGCCACGCTCGCCACGCTCGACCGGCACGGGCCGATGACGCTCGGTGAGG
CGGCGGCGCACGAGCGGGTGCAACCACCGTCCATGACCCGGGTGATCGCGACCCTGTCCGAGGCCGGCCTCGTCCATCGT
GGTCAGCATCCCTCCGACGGCCGGCAGGTGATCGCCGAGGTCACCGAGGCCGGCCGGGAGCTGCTCGCCGCGGACCGCCG
CCGCCGTGACGAGTGGCTGGCCGAGCGCCTGGTGGATCTCTCCCCGGCCGAGGCCGACGCGCTGCGGGTCGCCGCCCCGA
TCCTGGACCGCCTGGCCGGCCTGTAG

Upstream 100 bases:

>100_bases
GGGCACCGATTTCCCGGTCGCGGGCCCCCTCGGCCGCAGGGTGAAATGGACGTCCTAATCGCTCTTGAAGTTTAGCGATG
CTAACGAGTACTTTCGAGAA

Downstream 100 bases:

>100_bases
CCGTGGGGATGTTCCGGTAACTATGGGGACGCCACAGTAGCCATGGGAATGGTCCGGTAGCCGTGGGGATGTTCCGGTCG
CTGTCGGTCCGCAACTTCCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MESVSAAELASTLRLSVMRLSRRMRQERSSTLTPTQVATLATLDRHGPMTLGEAAAHERVQPPSMTRVIATLSEAGLVHR
GQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAERLVDLSPAEADALRVAAPILDRLAGL

Sequences:

>Translated_141_residues
MESVSAAELASTLRLSVMRLSRRMRQERSSTLTPTQVATLATLDRHGPMTLGEAAAHERVQPPSMTRVIATLSEAGLVHR
GQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAERLVDLSPAEADALRVAAPILDRLAGL
>Mature_141_residues
MESVSAAELASTLRLSVMRLSRRMRQERSSTLTPTQVATLATLDRHGPMTLGEAAAHERVQPPSMTRVIATLSEAGLVHR
GQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAERLVDLSPAEADALRVAAPILDRLAGL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15394; Mature: 15394

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVSAAELASTLRLSVMRLSRRMRQERSSTLTPTQVATLATLDRHGPMTLGEAAAHERV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC
QPPSMTRVIATLSEAGLVHRGQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAERLVDL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPAEADALRVAAPILDRLAGL
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESVSAAELASTLRLSVMRLSRRMRQERSSTLTPTQVATLATLDRHGPMTLGEAAAHERV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC
QPPSMTRVIATLSEAGLVHRGQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAERLVDL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPAEADALRVAAPILDRLAGL
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]