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The map label for this gene is 158318936

Identifier: 158318936

GI number: 158318936

Start: 8815621

End: 8816295

Strand: Reverse

Name: 158318936

Synonym: Franean1_7219

Alternate gene names: NA

Gene position: 8816295-8815621 (Counterclockwise)

Preceding gene: 158318937

Following gene: 158318933

Centisome position: 98.15

GC content: 79.56

Gene sequence:

>675_bases
GTGACGGGGCCGGTACCGGGCCGGGAGCGGCTCTTCGTCGCGCTGCTCCCGCCGACGGAGGTGGTGCGCGACCTGGCCAC
CGCCGTCTCTGAGGTAACCAGCGCAGCAGGGGCCGGCCGGGCTGGCGGAGCCGCCGGGAGCGTGGGCGTCTCCGGGAGCG
TGGGCGCCGCCGGATCGCCGGGGCCCGCCGGGGCGGGCGTGCCGCGGCTTCGCTGGGCGGATCCGTCGCGGTGGCACGTG
ACGCTGGCGTTCCTCGGGCCGGTCGAGCCCGGGACGCGGCCCGCGCTCGCCGAACGGCTCGGTCGGGTCGCCCACCGGCA
CGGCCCGGTCGAGCTGCGCCTCGACGGCGCCGGCCGCTTCGGCCACCGGGTGCTCTGGGCCCGGGTCGCCGGCGATCTCG
GGCCGCTGGCGGCGGGGGTGCGACGCGCGGCCGTCCGGGCCGGCGCGGACGGCGGCGACGACCGCCCGCTGCGGGCCCAC
CTCACCCTGGCCCGCGTTCCCGAGGGCACCGCCGCCGACCTGCGGCCACTGGTCCGCGCCCTCGGCGAGATCATGAAGCC
GTCGGCCTGGACGGCGCGGACCCTGACCCTGATGAGCAGCGTCGGTGGGCCGTCCCCCGTCTACAGCGTCGAGGGCGAGT
GGGACCTGAGCGGCTCGTCACCGGCCGGCCGGTAG

Upstream 100 bases:

>100_bases
CGGCCCACCTGCTGCTCGGCGTGCTGAGCAACCCGTCGTGCATCGCGGTCCGCGTGATCGAACGGCGCGGGCTGACGGCC
GACCAGGTCCGCGTCGCGCT

Downstream 100 bases:

>100_bases
CGGTACCCGACCCGCCGGACCGTCTCGATGTGGTCCCGGTGATGGCGGCCCAGCTTGCGCCGTAGCCGGGTGATCATGAC
GTCGACGGTGCGCGGGGCGG

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTGPVPGRERLFVALLPPTEVVRDLATAVSEVTSAAGAGRAGGAAGSVGVSGSVGAAGSPGPAGAGVPRLRWADPSRWHV
TLAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRFGHRVLWARVAGDLGPLAAGVRRAAVRAGADGGDDRPLRAH
LTLARVPEGTAADLRPLVRALGEIMKPSAWTARTLTLMSSVGGPSPVYSVEGEWDLSGSSPAGR

Sequences:

>Translated_224_residues
MTGPVPGRERLFVALLPPTEVVRDLATAVSEVTSAAGAGRAGGAAGSVGVSGSVGAAGSPGPAGAGVPRLRWADPSRWHV
TLAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRFGHRVLWARVAGDLGPLAAGVRRAAVRAGADGGDDRPLRAH
LTLARVPEGTAADLRPLVRALGEIMKPSAWTARTLTLMSSVGGPSPVYSVEGEWDLSGSSPAGR
>Mature_223_residues
TGPVPGRERLFVALLPPTEVVRDLATAVSEVTSAAGAGRAGGAAGSVGVSGSVGAAGSPGPAGAGVPRLRWADPSRWHVT
LAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRFGHRVLWARVAGDLGPLAAGVRRAAVRAGADGGDDRPLRAHL
TLARVPEGTAADLRPLVRALGEIMKPSAWTARTLTLMSSVGGPSPVYSVEGEWDLSGSSPAGR

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22777; Mature: 22646

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPVPGRERLFVALLPPTEVVRDLATAVSEVTSAAGAGRAGGAAGSVGVSGSVGAAGSP
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GPAGAGVPRLRWADPSRWHVTLAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRF
CCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
GHRVLWARVAGDLGPLAAGVRRAAVRAGADGGDDRPLRAHLTLARVPEGTAADLRPLVRA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH
LGEIMKPSAWTARTLTLMSSVGGPSPVYSVEGEWDLSGSSPAGR
HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCCC
>Mature Secondary Structure 
TGPVPGRERLFVALLPPTEVVRDLATAVSEVTSAAGAGRAGGAAGSVGVSGSVGAAGSP
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GPAGAGVPRLRWADPSRWHVTLAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRF
CCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
GHRVLWARVAGDLGPLAAGVRRAAVRAGADGGDDRPLRAHLTLARVPEGTAADLRPLVRA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH
LGEIMKPSAWTARTLTLMSSVGGPSPVYSVEGEWDLSGSSPAGR
HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA