| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is msuE [H]
Identifier: 158318933
GI number: 158318933
Start: 8812732
End: 8813325
Strand: Reverse
Name: msuE [H]
Synonym: Franean1_7216
Alternate gene names: 158318933
Gene position: 8813325-8812732 (Counterclockwise)
Preceding gene: 158318936
Following gene: 158318932
Centisome position: 98.12
GC content: 70.37
Gene sequence:
>594_bases ATGCCACAGACCACATCTCCCGCTTCGCCGCGCCTCGTCATGATCATCGGCAACCCACGGACCGGCTCCCGGACGCTGAC CCTCGCCCGCTTCCTCGCGGAGCGGATCGCGGACGAGCTGCCGGTCGCGAGCATCGAGATCATCGATCTCTCCACGCTGG CCCGGCACCTCTTCGCCGACGACGGCCGGGTCGCCGCGGCCCTCACGACCGCGGCCGAGGCGGATCTGCTGATCGTCGCG TCGCCGGTCTACAAGGGCAGCTACACCGGCCTGCTCAAGTCGTTCCTGGACCTGCTGCCCGGTGGGGCACTGCGGGGAGC GACCGCCGTACCGGTGGTCATCTCGGCGGCGCCGGACCACTCGGTGGCCGGGGAGCTCTACCTGCGCCCGGTCCTCGTGG AACTGGGCGCGACCGTCCCCGCCCGGTCGTTCGCGGTAATCGAGGAGCAGCTCCCGGACCTGGACATCGTGGTCGACTCC TGGGTTGTCTCGCACGCCCCCGTGCTTCGCGCCAGCGTCGCCGCACACATCGGGACGGCGCTCTTCGCCCAGGACGTCCG GGTGGAAAACGACCTCGTGGAGACGGCTCGATGA
Upstream 100 bases:
>100_bases GATGGCGACGACGAGTGATGGTGAGTGACGAGGACGAACTCGCGCGAAGTCCAGCCAGCGAACCCGCTCCGCGACGTCCA TCCTGACCGGAAGGCCGCTC
Downstream 100 bases:
>100_bases CGCTCGACACCCTCGGCCGCGACCCCTCGCCGCACCCAGACCAGCCACGGACGGCTCCAGCACCGGAACAGGCGTCCCCG TTGTCCCAGGTGCCCGCAGT
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPQTTSPASPRLVMIIGNPRTGSRTLTLARFLAERIADELPVASIEIIDLSTLARHLFADDGRVAAALTTAAEADLLIVA SPVYKGSYTGLLKSFLDLLPGGALRGATAVPVVISAAPDHSVAGELYLRPVLVELGATVPARSFAVIEEQLPDLDIVVDS WVVSHAPVLRASVAAHIGTALFAQDVRVENDLVETAR
Sequences:
>Translated_197_residues MPQTTSPASPRLVMIIGNPRTGSRTLTLARFLAERIADELPVASIEIIDLSTLARHLFADDGRVAAALTTAAEADLLIVA SPVYKGSYTGLLKSFLDLLPGGALRGATAVPVVISAAPDHSVAGELYLRPVLVELGATVPARSFAVIEEQLPDLDIVVDS WVVSHAPVLRASVAAHIGTALFAQDVRVENDLVETAR >Mature_196_residues PQTTSPASPRLVMIIGNPRTGSRTLTLARFLAERIADELPVASIEIIDLSTLARHLFADDGRVAAALTTAAEADLLIVAS PVYKGSYTGLLKSFLDLLPGGALRGATAVPVVISAAPDHSVAGELYLRPVLVELGATVPARSFAVIEEQLPDLDIVVDSW VVSHAPVLRASVAAHIGTALFAQDVRVENDLVETAR
Specific function: Catalyzes An NAD(P)H-Dependent Reduction Of Fmn, But Is Also Able To Reduce FAD Or Riboflavin. [C]
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019912 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 20736; Mature: 20605
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTTSPASPRLVMIIGNPRTGSRTLTLARFLAERIADELPVASIEIIDLSTLARHLFAD CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC DGRVAAALTTAAEADLLIVASPVYKGSYTGLLKSFLDLLPGGALRGATAVPVVISAAPDH CCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC SVAGELYLRPVLVELGATVPARSFAVIEEQLPDLDIVVDSWVVSHAPVLRASVAAHIGTA CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LFAQDVRVENDLVETAR HHHHHHHHHHHHHHCCC >Mature Secondary Structure PQTTSPASPRLVMIIGNPRTGSRTLTLARFLAERIADELPVASIEIIDLSTLARHLFAD CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC DGRVAAALTTAAEADLLIVASPVYKGSYTGLLKSFLDLLPGGALRGATAVPVVISAAPDH CCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC SVAGELYLRPVLVELGATVPARSFAVIEEQLPDLDIVVDSWVVSHAPVLRASVAAHIGTA CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LFAQDVRVENDLVETAR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]