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The map label for this gene is glnR [H]

Identifier: 158318935

GI number: 158318935

Start: 8815301

End: 8815675

Strand: Direct

Name: glnR [H]

Synonym: Franean1_7218

Alternate gene names: 158318935

Gene position: 8815301-8815675 (Clockwise)

Preceding gene: 158318934

Following gene: 158318938

Centisome position: 98.14

GC content: 71.73

Gene sequence:

>375_bases
GTGGCAGCCCATGCCGGCTTCGTCGCGAGTACACCCGTCAGAGGCGCCGTGGACGTCGACCGCCTGGCCTGGCAGGTCCT
GGTCGACGGACGGCCGATCGACCTCACCTACCTTGAGTTCGAGGTGCTCGACTACCTCGTGCGCAACCCGGGCCGTGTGC
ACAGCCGGGAGGAGCTGCTGCGCGAGGTGTGGCGGCAGGATCCCGGCGCCCTCGGCGCGTCCGCCCCGCGCACCGTCGAC
GTCATGATCACCCGGCTACGGCGCAAGCTGGGCCGCCATCACCGGGACCACATCGAGACGGTCCGGCGGGTCGGGTACCG
CTACCGGCCGGCCGGTGACGAGCCGCTCAGGTCCCACTCGCCCTCGACGCTGTAG

Upstream 100 bases:

>100_bases
CTCCCGACCCACGTCACCGCGCCCGTTCATCCCACCCGGCCCGTTCAACACACTCGTGTCATCCGACCTCGTGCCCAATC
CGAATCGCCTGGAGGCGTCC

Downstream 100 bases:

>100_bases
ACGGGGGACGGCCCACCGACGCTGCTCATCAGGGTCAGGGTCCGCGCCGTCCAGGCCGACGGCTTCATGATCTCGCCGAG
GGCGCGGACCAGTGGCCGCA

Product: winged helix family two component response transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAAHAGFVASTPVRGAVDVDRLAWQVLVDGRPIDLTYLEFEVLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVD
VMITRLRRKLGRHHRDHIETVRRVGYRYRPAGDEPLRSHSPSTL

Sequences:

>Translated_124_residues
MAAHAGFVASTPVRGAVDVDRLAWQVLVDGRPIDLTYLEFEVLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVD
VMITRLRRKLGRHHRDHIETVRRVGYRYRPAGDEPLRSHSPSTL
>Mature_123_residues
AAHAGFVASTPVRGAVDVDRLAWQVLVDGRPIDLTYLEFEVLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVDV
MITRLRRKLGRHHRDHIETVRRVGYRYRPAGDEPLRSHSPSTL

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 14157; Mature: 14026

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHAGFVASTPVRGAVDVDRLAWQVLVDGRPIDLTYLEFEVLDYLVRNPGRVHSREELL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
REVWRQDPGALGASAPRTVDVMITRLRRKLGRHHRDHIETVRRVGYRYRPAGDEPLRSHS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PSTL
CCCC
>Mature Secondary Structure 
AAHAGFVASTPVRGAVDVDRLAWQVLVDGRPIDLTYLEFEVLDYLVRNPGRVHSREELL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
REVWRQDPGALGASAPRTVDVMITRLRRKLGRHHRDHIETVRRVGYRYRPAGDEPLRSHS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PSTL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]