| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318938
Identifier: 158318938
GI number: 158318938
Start: 8816830
End: 8817909
Strand: Direct
Name: 158318938
Synonym: Franean1_7221
Alternate gene names: NA
Gene position: 8816830-8817909 (Clockwise)
Preceding gene: 158318935
Following gene: 158318941
Centisome position: 98.16
GC content: 75.09
Gene sequence:
>1080_bases GTGGTCTGCGACGGGATCGGCCCGACCGCCCACCGGCGGACGGCAATCGGGGGCACTATCGGAGCTGTGACGACGGTCCC CGAACTGGTGGCGCCCCGCGATCCCGGCCTGTCCAGAGCCTGGCGCTCGGACCGCCGTGCCGCCCGGCGCAGGCAGCCCG ACCTCCCGGTCGCGATGGCCCTGGTCACCGACGGTTCCGAACGCTCGACGGCGGACGTCCTGCGTGACGCTGGGGTCGAT GTCGTGGGGCTGCTGGCGCCGGAGCCGCTGGAGTCGCTGGCCTGGGCCGCCGAGGCGAAGGCCCCGCGCGCCTACAGCGA CCTGATCGCCCTGCTGTCGGACGACATCGAGGCGGTCTGCATCGAGATGTCGCCGCCGGCGTCCGACATCGTGGCCCGCC GGGCGGCCGAGGCCGGCCTGCACGTCCTGCTCGCGAAGCCGGCCACGGCCGAGGCCGAGGCGCTGCGCGCGGTGGCCGAC ATCGCCGAGGACGCCGATCTCGCCCACGTCGTCGCCCTGGACGGCCGGGCGTGGCCCGCGGCGTGGCACGTCCAGGCGTC GGTGCACTCGCTGGGCCGGCTGAGCCAGATCACCGTGGTCGGCGCGCCGTCCGGGCCGATCGGCCGGGCCGAGATCATCG ACCTGACGCTGCGCTGGTGCGGCGAGATCCTCGCCGTGTGCGCCGATCCCGGCAGCATGCCGGCGACCACGCTCACCCCC GACGCGCCGGTCACCCTGGCCCTGCTCGCCGCCAACGGGACGACCGTCCTGATCAACGAACGGATGGGCGGGGAGATCGC CACCGCCACGGTGACCGTCTGCGGCGAGGCGGGCCGCATGGTCGTCCAGGGGCGGCGGGTCCGCCGGCAGGACGGGACGG GCATTCGTGACCTGTGGATGCCGACGGTGCCCGCCGAGCGGCCCGGCCTGGTCGAGGCCACCTACGACGTCGTGCGGGCC ACCGAGCTGAACGACCCGGCCCTGGTGCGCGGCGCGACCTTCCACGACCTGCTCACCGCGACGCGCCTGCAGGTGGCGGC CGCGGCGTCTCACAAGCGGGGTGGCTGGGTCGAGCTTTGA
Upstream 100 bases:
>100_bases TTGACAACCAGCGTCCGTCAACCTCGGTTGACACGACCGCCACGGCGGGCACACCCGAGTGGCGTGACGCGGCCTGGTCA CAGCGGGCTGGTTCGAGTGG
Downstream 100 bases:
>100_bases GCCCGCCCACGGCGAGCCCCGGCCCCGCGGGGCCGGGGCCGGCTGCCCGTGCCGCGGCGGGCGGGCGGCGCAGGTCGAAC AGCGCGACGATCGCGGCGGC
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Dehydrogenases And Related Proteins-Like Protein; Oxidoreductase Domain-Containing Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVCDGIGPTAHRRTAIGGTIGAVTTVPELVAPRDPGLSRAWRSDRRAARRRQPDLPVAMALVTDGSERSTADVLRDAGVD VVGLLAPEPLESLAWAAEAKAPRAYSDLIALLSDDIEAVCIEMSPPASDIVARRAAEAGLHVLLAKPATAEAEALRAVAD IAEDADLAHVVALDGRAWPAAWHVQASVHSLGRLSQITVVGAPSGPIGRAEIIDLTLRWCGEILAVCADPGSMPATTLTP DAPVTLALLAANGTTVLINERMGGEIATATVTVCGEAGRMVVQGRRVRRQDGTGIRDLWMPTVPAERPGLVEATYDVVRA TELNDPALVRGATFHDLLTATRLQVAAAASHKRGGWVEL
Sequences:
>Translated_359_residues MVCDGIGPTAHRRTAIGGTIGAVTTVPELVAPRDPGLSRAWRSDRRAARRRQPDLPVAMALVTDGSERSTADVLRDAGVD VVGLLAPEPLESLAWAAEAKAPRAYSDLIALLSDDIEAVCIEMSPPASDIVARRAAEAGLHVLLAKPATAEAEALRAVAD IAEDADLAHVVALDGRAWPAAWHVQASVHSLGRLSQITVVGAPSGPIGRAEIIDLTLRWCGEILAVCADPGSMPATTLTP DAPVTLALLAANGTTVLINERMGGEIATATVTVCGEAGRMVVQGRRVRRQDGTGIRDLWMPTVPAERPGLVEATYDVVRA TELNDPALVRGATFHDLLTATRLQVAAAASHKRGGWVEL >Mature_359_residues MVCDGIGPTAHRRTAIGGTIGAVTTVPELVAPRDPGLSRAWRSDRRAARRRQPDLPVAMALVTDGSERSTADVLRDAGVD VVGLLAPEPLESLAWAAEAKAPRAYSDLIALLSDDIEAVCIEMSPPASDIVARRAAEAGLHVLLAKPATAEAEALRAVAD IAEDADLAHVVALDGRAWPAAWHVQASVHSLGRLSQITVVGAPSGPIGRAEIIDLTLRWCGEILAVCADPGSMPATTLTP DAPVTLALLAANGTTVLINERMGGEIATATVTVCGEAGRMVVQGRRVRRQDGTGIRDLWMPTVPAERPGLVEATYDVVRA TELNDPALVRGATFHDLLTATRLQVAAAASHKRGGWVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37611; Mature: 37611
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCDGIGPTAHRRTAIGGTIGAVTTVPELVAPRDPGLSRAWRSDRRAARRRQPDLPVAMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE LVTDGSERSTADVLRDAGVDVVGLLAPEPLESLAWAAEAKAPRAYSDLIALLSDDIEAVC EEECCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE IEMSPPASDIVARRAAEAGLHVLLAKPATAEAEALRAVADIAEDADLAHVVALDGRAWPA EECCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC AWHVQASVHSLGRLSQITVVGAPSGPIGRAEIIDLTLRWCGEILAVCADPGSMPATTLTP EEEEHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC DAPVTLALLAANGTTVLINERMGGEIATATVTVCGEAGRMVVQGRRVRRQDGTGIRDLWM CCCEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHCCCCCCHHHCC PTVPAERPGLVEATYDVVRATELNDPALVRGATFHDLLTATRLQVAAAASHKRGGWVEL CCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVCDGIGPTAHRRTAIGGTIGAVTTVPELVAPRDPGLSRAWRSDRRAARRRQPDLPVAMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE LVTDGSERSTADVLRDAGVDVVGLLAPEPLESLAWAAEAKAPRAYSDLIALLSDDIEAVC EEECCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE IEMSPPASDIVARRAAEAGLHVLLAKPATAEAEALRAVADIAEDADLAHVVALDGRAWPA EECCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC AWHVQASVHSLGRLSQITVVGAPSGPIGRAEIIDLTLRWCGEILAVCADPGSMPATTLTP EEEEHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC DAPVTLALLAANGTTVLINERMGGEIATATVTVCGEAGRMVVQGRRVRRQDGTGIRDLWM CCCEEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHCCCCCCHHHCC PTVPAERPGLVEATYDVVRATELNDPALVRGATFHDLLTATRLQVAAAASHKRGGWVEL CCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA