| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318920
Identifier: 158318920
GI number: 158318920
Start: 8795202
End: 8796122
Strand: Direct
Name: 158318920
Synonym: Franean1_7203
Alternate gene names: NA
Gene position: 8795202-8796122 (Clockwise)
Preceding gene: 158318919
Following gene: 158318924
Centisome position: 97.92
GC content: 70.9
Gene sequence:
>921_bases ATGGACGAGGCCACGCGCGCTGCGGTGAAATGGCCGGCGCACCGGAGTGCGCCCCAGGTCGAGCTGCGCACCGACATCCC ACATTCCGCCCGGATGTACGACTACTTCCTCGGCGGCAAGGACAACTTCCCCGCCGACCGCGAAGCGGCCGAAGACCTGA TGGCCGTCTACCCGGCCACCAGGACGACGGCGTTACAGGGCCGGTCGTTCATGACGAGGGCGATCCGCCACCTGGCCCGC GACGCCGGGATACGCCAGTTCCTCGACATCGGGACGGGCATCCCGGCCAGCCCCAACCTGCACGAGACGGCACAGGCGGC CGCCCCCGCGGCTCGGGTCCTGTACGTCGACAACGACCCGATCGTGCTGTCGCATGCTCGCGCCCTGCTGACGAGCACCC CGCAGGGCCGGACGGCCTACCTGGACGCGGACCTGCTCGATCCCAGCAGGATCATCCGTTCCGCCGAGCTGCGCGACACT TTCGACCTCGACCAGCCCGTCGCGTTGTCCCTGCTCTCGATCCTGCACTTCGTGCCGGACGACCGGGACCCGGCGGGCAT CGTCCAGGAGCTGCTCGGGGCCCTCGCTCCGGGTAGCTACCTGGCTGTCGCCCACGCGACCGGGGATTTCGTGGCCCCGG AGGTCGCCGAGCTCGGCACCACGATCTACCAGGACCGCGGGATCCCCTTCCAGCCCCGGTCCCGCGCCGAGATCACCGCG TTGCTCGGCGGCCTCGAGCTGGTGGCGCCCGGGTTGGTCCCGGCCCACCGCTGGCAGCCGGAGGACGGGTCGGCGGAGCT CACGGACGCCGAGGTCAGCAGCTACGGGGCGATCGCACGCAAACCCGTGAATCGCCCAGACGGCAACAATCACCAGGGCG CGGGTCAGCCCCAGAGGTCGCAGTGGTGCGCCACGGCGTAG
Upstream 100 bases:
>100_bases CCGCCGACCGGTCCTGAAGCGGCTGGTCGCGGGCGGTCCGCGGAGAGCACCCGCCTGGGCGACGGCGGCCAGGGGTGACT GCGACAGCCCGGAGGCGGGG
Downstream 100 bases:
>100_bases CCGGACCGCGCAAGCAGCACGCCTGGCTCGAGGGCCAGCCGGTCCGGAACGGTCGAGTTCCATTCCCCCGGCCAGGGCGG CCAGCCCGGCAGCACCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA
Sequences:
>Translated_306_residues MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA >Mature_306_residues MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33020; Mature: 33020
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPAT CCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCC RTTALQGRSFMTRAIRHLARDAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCC IVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDTFDLDQPVALSLLSILHFVPD EEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRS HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC QWCATA CCCCCC >Mature Secondary Structure MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPAT CCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCC RTTALQGRSFMTRAIRHLARDAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCC IVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDTFDLDQPVALSLLSILHFVPD EEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRS HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC QWCATA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA